UruDendro4 : A benchmark dataset for automatic tree-ring detection in cross-section images of Pinus taeda L.

Marichal, Henry - Blanco, Joaquín - Passarella, Diego - Randall, Gregory

Resumen:

Tree-ring growth represents the annual wood increment for a tree, and quantifying it allows researchers to assess which silvicultural practices are best suited for each species. Manual measurement of this growth is time-consuming and often imprecise, as it is typically performed along 4 to 8 radial directions on a cross-sectional disc. In recent years, automated algorithms and datasets have emerged to enhance accuracy and automate the delineation of annual rings in cross-sectional images.To address the scarcity of wood cross-section data, we introduce the UruDendro4 dataset?a collection of 102 image samples of Pinus taeda L., each manually annotated with annual growth rings. Unlike existing public datasets, UruDendro4 includes samples extracted at multiple heights along the stem, allowing for the volumetric modeling of annual growth using manually delineated rings. This dataset (images and annotations) allows the development of volumetric models for annual wood estimation based on cross-sectional imagery.Additionally, we provide a performance baseline for automatic ring detection on this dataset using state-of-the-art methods. The highest performance was achieved by the DeepCS-TRD method, with a mean Average Precision of 0.838, a mean Average Recall of 0.782, and an Adapted Rand Error score of 0.084. A series of ablation experiments were conducted to empirically validate the final parameter configuration. Furthermore, we empirically demonstrate that training a learning model including this dataset improves the model?s generalization in the tree-ring detection task.

Detalles Bibliográficos
2025
Beca doctorado ANII
Proyecto ANII-FMV-176061
Image-processing
Wood-cross-section
Tree-rings
Tree-volume
Deep-learning
Training
Measurement
Adaptation models
Temperature
Precipitation
Trees (botanical)
Production
Soil
Performance gain
Pattern recognition
Inglés
Universidad de la República
COLIBRI
https://hdl.handle.net/20.500.12008/53417
Acceso abierto
Licencia Creative Commons Atribución - No Comercial - Compartir Igual (CC - By-NC-SA 4.0)