Germline genome stability is regulated by the chromatin remodeler SMARCAD1 in C. elegans

Veroli, Maria Victoria

Supervisor(es): Yanowitz, Judith L.

Resumen:

The reproductive success of a specie is critically influenced by its ability to protect the genetic information that will be transmitted across generations. As a consequence, it is not surprising the low tolerance germ cells have to the defective function of key genes involved in zygotic development. Among those genes are those directly involved in the maintenance of germline genome stability, that guard the genome from endogenous and exogenous insults through their involvement in DNA repair mechanisms. Consequently, due to this tight link between reproduction and DNA damage repair, the effects on fertility can be used as a readout of defects in the DNA repair machinery. One of those proteins is the chromatin remodeler SMARCAD1, which is involved in the homologous recombination pathway and has been involved in mice fertility. So far, an integrated understanding of SMARCAD1 functions remained to be addressed because of the lack of a suitable whole organism model in which to perform the studies. Here, we introduce a new player that will aid studies that allow the link of specific cellular functions with their effect on reproduction and development, the nematode Caenorhabditis elegans. We hypothesize that C. elegans SMARCAD1 ortholog promotes fertility by aiding in the maintenance of germline genome stability. Through the creation of the null allele of SMARCAD1 ortholog, smrd-1, we show that its function in HR is conserved and test that this function contributes to its role in genome stability. We also present for the first time studies on smrd-1 function in meiosis, showing loss of smrd-1 elicits a differential response to DNA damage in meiotic versus mitotic nuclei. Based on phenotypical and experimental results, we show that smrd-1 does not confer a mutator phenotype and that the decrease in fertility of this mutant may be associated with changes in epigenetic modifications. Overall, this work provides a new model that expands the understanding of smrd-1 functions which encompasses its effect on reproduction.


Detalles Bibliográficos
2022
Fulbright Uruguay
Agencia Nacional de Investigación e Innovación
SMARCAD1
C. elegans
Genomic stability
Ciencias Médicas y de la Salud
Medicina Básica
Bioquímica y Biología Molecular
Inglés
Agencia Nacional de Investigación e Innovación
REDI
https://hdl.handle.net/20.500.12381/3388
http://d-scholarship.pitt.edu/id/eprint/43634
Acceso abierto
Reconocimiento-NoComercial-SinObraDerivada 4.0 Internacional. (CC BY-NC-ND)
_version_ 1814959253137391616
author Veroli, Maria Victoria
author_facet Veroli, Maria Victoria
author_role author
bitstream.checksum.fl_str_mv a4ce09f01b5dd771727aa05c73851623
e9493026d5c11863d33464e512829b1d
bitstream.checksumAlgorithm.fl_str_mv MD5
MD5
bitstream.url.fl_str_mv https://redi.anii.org.uy/jspui/bitstream/20.500.12381/3388/2/license.txt
https://redi.anii.org.uy/jspui/bitstream/20.500.12381/3388/1/Veroli_MV_PhDthesis_2022.pdf
collection REDI
dc.creator.advisor.none.fl_str_mv Yanowitz, Judith L.
dc.creator.none.fl_str_mv Veroli, Maria Victoria
dc.date.accessioned.none.fl_str_mv 2024-01-12T13:30:50Z
dc.date.available.none.fl_str_mv 2024-03-01T03:05:11Z
dc.date.issued.none.fl_str_mv 2022-07-12
dc.description.abstract.none.fl_txt_mv The reproductive success of a specie is critically influenced by its ability to protect the genetic information that will be transmitted across generations. As a consequence, it is not surprising the low tolerance germ cells have to the defective function of key genes involved in zygotic development. Among those genes are those directly involved in the maintenance of germline genome stability, that guard the genome from endogenous and exogenous insults through their involvement in DNA repair mechanisms. Consequently, due to this tight link between reproduction and DNA damage repair, the effects on fertility can be used as a readout of defects in the DNA repair machinery. One of those proteins is the chromatin remodeler SMARCAD1, which is involved in the homologous recombination pathway and has been involved in mice fertility. So far, an integrated understanding of SMARCAD1 functions remained to be addressed because of the lack of a suitable whole organism model in which to perform the studies. Here, we introduce a new player that will aid studies that allow the link of specific cellular functions with their effect on reproduction and development, the nematode Caenorhabditis elegans. We hypothesize that C. elegans SMARCAD1 ortholog promotes fertility by aiding in the maintenance of germline genome stability. Through the creation of the null allele of SMARCAD1 ortholog, smrd-1, we show that its function in HR is conserved and test that this function contributes to its role in genome stability. We also present for the first time studies on smrd-1 function in meiosis, showing loss of smrd-1 elicits a differential response to DNA damage in meiotic versus mitotic nuclei. Based on phenotypical and experimental results, we show that smrd-1 does not confer a mutator phenotype and that the decrease in fertility of this mutant may be associated with changes in epigenetic modifications. Overall, this work provides a new model that expands the understanding of smrd-1 functions which encompasses its effect on reproduction.
dc.description.sponsorship.none.fl_txt_mv Fulbright Uruguay
Agencia Nacional de Investigación e Innovación
dc.identifier.anii.es.fl_str_mv POS_FUL_2016_1_1005359
dc.identifier.uri.none.fl_str_mv https://hdl.handle.net/20.500.12381/3388
dc.identifier.url.none.fl_str_mv http://d-scholarship.pitt.edu/id/eprint/43634
dc.language.iso.none.fl_str_mv eng
dc.publisher.es.fl_str_mv University of Pittsburgh
dc.rights.*.fl_str_mv Acceso abierto
dc.rights.embargoterm.*.fl_str_mv 2024-03-01
dc.rights.license.none.fl_str_mv Reconocimiento-NoComercial-SinObraDerivada 4.0 Internacional. (CC BY-NC-ND)
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
dc.source.none.fl_str_mv reponame:REDI
instname:Agencia Nacional de Investigación e Innovación
instacron:Agencia Nacional de Investigación e Innovación
dc.subject.anii.none.fl_str_mv Ciencias Médicas y de la Salud
Medicina Básica
Bioquímica y Biología Molecular
dc.subject.es.fl_str_mv SMARCAD1
C. elegans
Genomic stability
dc.title.none.fl_str_mv Germline genome stability is regulated by the chromatin remodeler SMARCAD1 in C. elegans
dc.type.es.fl_str_mv Tesis de doctorado
dc.type.none.fl_str_mv info:eu-repo/semantics/doctoralThesis
dc.type.version.es.fl_str_mv Borrador
dc.type.version.none.fl_str_mv info:eu-repo/semantics/draft
description The reproductive success of a specie is critically influenced by its ability to protect the genetic information that will be transmitted across generations. As a consequence, it is not surprising the low tolerance germ cells have to the defective function of key genes involved in zygotic development. Among those genes are those directly involved in the maintenance of germline genome stability, that guard the genome from endogenous and exogenous insults through their involvement in DNA repair mechanisms. Consequently, due to this tight link between reproduction and DNA damage repair, the effects on fertility can be used as a readout of defects in the DNA repair machinery. One of those proteins is the chromatin remodeler SMARCAD1, which is involved in the homologous recombination pathway and has been involved in mice fertility. So far, an integrated understanding of SMARCAD1 functions remained to be addressed because of the lack of a suitable whole organism model in which to perform the studies. Here, we introduce a new player that will aid studies that allow the link of specific cellular functions with their effect on reproduction and development, the nematode Caenorhabditis elegans. We hypothesize that C. elegans SMARCAD1 ortholog promotes fertility by aiding in the maintenance of germline genome stability. Through the creation of the null allele of SMARCAD1 ortholog, smrd-1, we show that its function in HR is conserved and test that this function contributes to its role in genome stability. We also present for the first time studies on smrd-1 function in meiosis, showing loss of smrd-1 elicits a differential response to DNA damage in meiotic versus mitotic nuclei. Based on phenotypical and experimental results, we show that smrd-1 does not confer a mutator phenotype and that the decrease in fertility of this mutant may be associated with changes in epigenetic modifications. Overall, this work provides a new model that expands the understanding of smrd-1 functions which encompasses its effect on reproduction.
eu_rights_str_mv openAccess
format doctoralThesis
id REDI_13f2d38db51066b9703466e5698fa7ac
identifier_str_mv POS_FUL_2016_1_1005359
instacron_str Agencia Nacional de Investigación e Innovación
institution Agencia Nacional de Investigación e Innovación
instname_str Agencia Nacional de Investigación e Innovación
language eng
network_acronym_str REDI
network_name_str REDI
oai_identifier_str oai:redi.anii.org.uy:20.500.12381/3388
publishDate 2022
reponame_str REDI
repository.mail.fl_str_mv jmaldini@anii.org.uy
repository.name.fl_str_mv REDI - Agencia Nacional de Investigación e Innovación
repository_id_str 9421
rights_invalid_str_mv Reconocimiento-NoComercial-SinObraDerivada 4.0 Internacional. (CC BY-NC-ND)
Acceso abierto
2024-03-01
spelling Reconocimiento-NoComercial-SinObraDerivada 4.0 Internacional. (CC BY-NC-ND)Acceso abiertoLos datos de la tesis no han sido publicados aun porque restan hacer mas experimentos para enviarlo a una revista científica internacional.2024-03-01info:eu-repo/semantics/openAccess2024-01-12T13:30:50Z2024-03-01T03:05:11Z2022-07-12https://hdl.handle.net/20.500.12381/3388POS_FUL_2016_1_1005359http://d-scholarship.pitt.edu/id/eprint/43634The reproductive success of a specie is critically influenced by its ability to protect the genetic information that will be transmitted across generations. As a consequence, it is not surprising the low tolerance germ cells have to the defective function of key genes involved in zygotic development. Among those genes are those directly involved in the maintenance of germline genome stability, that guard the genome from endogenous and exogenous insults through their involvement in DNA repair mechanisms. Consequently, due to this tight link between reproduction and DNA damage repair, the effects on fertility can be used as a readout of defects in the DNA repair machinery. One of those proteins is the chromatin remodeler SMARCAD1, which is involved in the homologous recombination pathway and has been involved in mice fertility. So far, an integrated understanding of SMARCAD1 functions remained to be addressed because of the lack of a suitable whole organism model in which to perform the studies. Here, we introduce a new player that will aid studies that allow the link of specific cellular functions with their effect on reproduction and development, the nematode Caenorhabditis elegans. We hypothesize that C. elegans SMARCAD1 ortholog promotes fertility by aiding in the maintenance of germline genome stability. Through the creation of the null allele of SMARCAD1 ortholog, smrd-1, we show that its function in HR is conserved and test that this function contributes to its role in genome stability. We also present for the first time studies on smrd-1 function in meiosis, showing loss of smrd-1 elicits a differential response to DNA damage in meiotic versus mitotic nuclei. Based on phenotypical and experimental results, we show that smrd-1 does not confer a mutator phenotype and that the decrease in fertility of this mutant may be associated with changes in epigenetic modifications. Overall, this work provides a new model that expands the understanding of smrd-1 functions which encompasses its effect on reproduction.Fulbright UruguayAgencia Nacional de Investigación e InnovaciónengUniversity of PittsburghSMARCAD1C. elegansGenomic stabilityCiencias Médicas y de la SaludMedicina BásicaBioquímica y Biología MolecularGermline genome stability is regulated by the chromatin remodeler SMARCAD1 in C. elegansTesis de doctoradoBorradorinfo:eu-repo/semantics/draftinfo:eu-repo/semantics/doctoralThesis//Ciencias Médicas y de la Salud/Medicina Básica/Bioquímica y Biología Molecularreponame:REDIinstname:Agencia Nacional de Investigación e Innovacióninstacron:Agencia Nacional de Investigación e InnovaciónVeroli, Maria VictoriaYanowitz, Judith L.LICENSElicense.txtlicense.txttext/plain; charset=utf-84967https://redi.anii.org.uy/jspui/bitstream/20.500.12381/3388/2/license.txta4ce09f01b5dd771727aa05c73851623MD52ORIGINALVeroli_MV_PhDthesis_2022.pdfVeroli_MV_PhDthesis_2022.pdfapplication/pdf11047357https://redi.anii.org.uy/jspui/bitstream/20.500.12381/3388/1/Veroli_MV_PhDthesis_2022.pdfe9493026d5c11863d33464e512829b1dMD5120.500.12381/33882024-03-01 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- Agencia Nacional de Investigación e Innovaciónfalse
spellingShingle Germline genome stability is regulated by the chromatin remodeler SMARCAD1 in C. elegans
Veroli, Maria Victoria
SMARCAD1
C. elegans
Genomic stability
Ciencias Médicas y de la Salud
Medicina Básica
Bioquímica y Biología Molecular
status_str draft
title Germline genome stability is regulated by the chromatin remodeler SMARCAD1 in C. elegans
title_full Germline genome stability is regulated by the chromatin remodeler SMARCAD1 in C. elegans
title_fullStr Germline genome stability is regulated by the chromatin remodeler SMARCAD1 in C. elegans
title_full_unstemmed Germline genome stability is regulated by the chromatin remodeler SMARCAD1 in C. elegans
title_short Germline genome stability is regulated by the chromatin remodeler SMARCAD1 in C. elegans
title_sort Germline genome stability is regulated by the chromatin remodeler SMARCAD1 in C. elegans
topic SMARCAD1
C. elegans
Genomic stability
Ciencias Médicas y de la Salud
Medicina Básica
Bioquímica y Biología Molecular
url https://hdl.handle.net/20.500.12381/3388
http://d-scholarship.pitt.edu/id/eprint/43634