Allostery and protein plasticity: the keystones for bacterial signaling and regulation

Imelio, Juan Andres - Trajtenberg, Felipe - Buschiazzo, Alejandro

Resumen:

Bacteria sense intracellular and environmental signals using an array of proteins as antennas. The information is transmit- ted from such sensory modules to other protein domains that act as output effectors. Sensor and effector can be part of the same polypeptide or instead be separate diffusible proteins that interact specifically. The output effector modules regulate physiologic responses, allowing the cells to adapt to the varying conditions. These biological machineries are known as signal transduction systems (STSs). Despite the captivating architectural diversity exhibited by STS proteins, a universal feature is their allosteric regulation: signal binding at one site modifies the activity at a physically distant site. Allostery requires protein plasticity, precisely encoded within their 3D structures, and implicating programmed molecular motions. This review summarizes how STS proteins connect stimuli to specific responses by exploiting allostery and protein plasticity. Illustrative examples spanning a wide variety of protein folds will focus on one- and two-component systems (TCSs). The former encompass the entire transmission route within a single polypeptide, whereas TCSs have evolved as separate dif- fusible proteins that interact specifically, sometimes including additional intermediary proteins in the pathway. Irrespective of their structural diversity, STS proteins are able to modulate their own molecular motions, which can be relatively slow, rigid-body movements, all the way to fast fluctuations in the form of macromolecular flexibility, thus spanning a continuous protein dynamics spectrum. In sum, STSs rely on allostery to steer information transmission, going from simple two-state switching to rich multi-state conformational order/disorder transitions.


Detalles Bibliográficos
2021
Agencia Nacional de Investigación e Innovación
Unit of Integrative Microbiology of Zoonotic Agents IMiZA, Joint International Units program, Institut Pasteur/Institut Pasteur de Montevideo.
Alosterismo
Dinámica de proteínas
Señalización bacteriana
Regulación
Fosforilación
Sistemas de dos componentes
Ciencias Naturales y Exactas
Ciencias Biológicas
Bioquímica y Biología Molecular
Biología Celular, Microbiología
Inglés
Institut Pasteur de Montevideo
IPMON en REDI
https://hdl.handle.net/20.500.12381/603
https://www.doi.org/10.1007/s12551-021-00892-9
Acceso abierto
Reconocimiento-NoComercial-SinObraDerivada 4.0 Internacional. (CC BY-NC-ND)
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author Imelio, Juan Andres
author2 Trajtenberg, Felipe
Buschiazzo, Alejandro
author2_role author
author
author_facet Imelio, Juan Andres
Trajtenberg, Felipe
Buschiazzo, Alejandro
author_role author
bitstream.checksum.fl_str_mv 2d97768b1a25a7df5a347bb58fd2d77f
dbdfb10c01c9a2871498c80f4efabc1f
bitstream.checksumAlgorithm.fl_str_mv MD5
MD5
bitstream.url.fl_str_mv https://redi.anii.org.uy/jspui/bitstream/20.500.12381/603/2/license.txt
https://redi.anii.org.uy/jspui/bitstream/20.500.12381/603/1/Imelio2021_BiophysRev.pdf
collection IPMON en REDI
dc.creator.none.fl_str_mv Imelio, Juan Andres
Trajtenberg, Felipe
Buschiazzo, Alejandro
dc.date.accessioned.none.fl_str_mv 2022-07-01T15:04:05Z
dc.date.available.none.fl_str_mv 2022-11-10T03:05:09Z
dc.date.issued.none.fl_str_mv 2021-11-10
dc.description.abstract.none.fl_txt_mv Bacteria sense intracellular and environmental signals using an array of proteins as antennas. The information is transmit- ted from such sensory modules to other protein domains that act as output effectors. Sensor and effector can be part of the same polypeptide or instead be separate diffusible proteins that interact specifically. The output effector modules regulate physiologic responses, allowing the cells to adapt to the varying conditions. These biological machineries are known as signal transduction systems (STSs). Despite the captivating architectural diversity exhibited by STS proteins, a universal feature is their allosteric regulation: signal binding at one site modifies the activity at a physically distant site. Allostery requires protein plasticity, precisely encoded within their 3D structures, and implicating programmed molecular motions. This review summarizes how STS proteins connect stimuli to specific responses by exploiting allostery and protein plasticity. Illustrative examples spanning a wide variety of protein folds will focus on one- and two-component systems (TCSs). The former encompass the entire transmission route within a single polypeptide, whereas TCSs have evolved as separate dif- fusible proteins that interact specifically, sometimes including additional intermediary proteins in the pathway. Irrespective of their structural diversity, STS proteins are able to modulate their own molecular motions, which can be relatively slow, rigid-body movements, all the way to fast fluctuations in the form of macromolecular flexibility, thus spanning a continuous protein dynamics spectrum. In sum, STSs rely on allostery to steer information transmission, going from simple two-state switching to rich multi-state conformational order/disorder transitions.
dc.description.sponsorship.none.fl_txt_mv Agencia Nacional de Investigación e Innovación
Unit of Integrative Microbiology of Zoonotic Agents IMiZA, Joint International Units program, Institut Pasteur/Institut Pasteur de Montevideo.
dc.identifier.anii.es.fl_str_mv FCE_1_2017_1_136291
dc.identifier.doi.none.fl_str_mv https://www.doi.org/10.1007/s12551-021-00892-9
dc.identifier.uri.none.fl_str_mv https://hdl.handle.net/20.500.12381/603
dc.language.iso.none.fl_str_mv eng
dc.publisher.es.fl_str_mv Springer Nature
dc.relation.none.fl_str_mv https://hdl.handle.net/20.500.12381/602
https://hdl.handle.net/20.500.12381/604
dc.rights.embargoterm.es.fl_str_mv 2022-11-10
dc.rights.es.fl_str_mv Acceso abierto
dc.rights.license.none.fl_str_mv Reconocimiento-NoComercial-SinObraDerivada 4.0 Internacional. (CC BY-NC-ND)
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
dc.source.es.fl_str_mv Biophysical Reviews
dc.source.none.fl_str_mv reponame:IPMON en REDI
instname:Institut Pasteur de Montevideo
instacron:Institut Pasteur de Montevideo
dc.subject.anii.none.fl_str_mv Ciencias Naturales y Exactas
Ciencias Biológicas
Bioquímica y Biología Molecular
Biología Celular, Microbiología
dc.subject.es.fl_str_mv Alosterismo
Dinámica de proteínas
Señalización bacteriana
Regulación
Fosforilación
Sistemas de dos componentes
dc.title.none.fl_str_mv Allostery and protein plasticity: the keystones for bacterial signaling and regulation
dc.type.es.fl_str_mv Artículo
dc.type.none.fl_str_mv info:eu-repo/semantics/article
dc.type.version.es.fl_str_mv Aceptado
dc.type.version.none.fl_str_mv info:eu-repo/semantics/acceptedVersion
description Bacteria sense intracellular and environmental signals using an array of proteins as antennas. The information is transmit- ted from such sensory modules to other protein domains that act as output effectors. Sensor and effector can be part of the same polypeptide or instead be separate diffusible proteins that interact specifically. The output effector modules regulate physiologic responses, allowing the cells to adapt to the varying conditions. These biological machineries are known as signal transduction systems (STSs). Despite the captivating architectural diversity exhibited by STS proteins, a universal feature is their allosteric regulation: signal binding at one site modifies the activity at a physically distant site. Allostery requires protein plasticity, precisely encoded within their 3D structures, and implicating programmed molecular motions. This review summarizes how STS proteins connect stimuli to specific responses by exploiting allostery and protein plasticity. Illustrative examples spanning a wide variety of protein folds will focus on one- and two-component systems (TCSs). The former encompass the entire transmission route within a single polypeptide, whereas TCSs have evolved as separate dif- fusible proteins that interact specifically, sometimes including additional intermediary proteins in the pathway. Irrespective of their structural diversity, STS proteins are able to modulate their own molecular motions, which can be relatively slow, rigid-body movements, all the way to fast fluctuations in the form of macromolecular flexibility, thus spanning a continuous protein dynamics spectrum. In sum, STSs rely on allostery to steer information transmission, going from simple two-state switching to rich multi-state conformational order/disorder transitions.
eu_rights_str_mv openAccess
format article
id IPMON_9c9696815a49af0777d57e7ed903e8ae
identifier_str_mv FCE_1_2017_1_136291
instacron_str Institut Pasteur de Montevideo
institution Institut Pasteur de Montevideo
instname_str Institut Pasteur de Montevideo
language eng
network_acronym_str IPMON
network_name_str IPMON en REDI
oai_identifier_str oai:redi.anii.org.uy:20.500.12381/603
publishDate 2021
reponame_str IPMON en REDI
repository.mail.fl_str_mv msarroca@pasteur.edu.uy
repository.name.fl_str_mv IPMON en REDI - Institut Pasteur de Montevideo
repository_id_str 9421_2
rights_invalid_str_mv Reconocimiento-NoComercial-SinObraDerivada 4.0 Internacional. (CC BY-NC-ND)
Acceso abierto
2022-11-10
spelling Reconocimiento-NoComercial-SinObraDerivada 4.0 Internacional. (CC BY-NC-ND)Acceso abierto2022-11-10info:eu-repo/semantics/openAccess2022-07-01T15:04:05Z2022-11-10T03:05:09Z2021-11-10https://hdl.handle.net/20.500.12381/603FCE_1_2017_1_136291https://www.doi.org/10.1007/s12551-021-00892-9Bacteria sense intracellular and environmental signals using an array of proteins as antennas. The information is transmit- ted from such sensory modules to other protein domains that act as output effectors. Sensor and effector can be part of the same polypeptide or instead be separate diffusible proteins that interact specifically. The output effector modules regulate physiologic responses, allowing the cells to adapt to the varying conditions. These biological machineries are known as signal transduction systems (STSs). Despite the captivating architectural diversity exhibited by STS proteins, a universal feature is their allosteric regulation: signal binding at one site modifies the activity at a physically distant site. Allostery requires protein plasticity, precisely encoded within their 3D structures, and implicating programmed molecular motions. This review summarizes how STS proteins connect stimuli to specific responses by exploiting allostery and protein plasticity. Illustrative examples spanning a wide variety of protein folds will focus on one- and two-component systems (TCSs). The former encompass the entire transmission route within a single polypeptide, whereas TCSs have evolved as separate dif- fusible proteins that interact specifically, sometimes including additional intermediary proteins in the pathway. Irrespective of their structural diversity, STS proteins are able to modulate their own molecular motions, which can be relatively slow, rigid-body movements, all the way to fast fluctuations in the form of macromolecular flexibility, thus spanning a continuous protein dynamics spectrum. In sum, STSs rely on allostery to steer information transmission, going from simple two-state switching to rich multi-state conformational order/disorder transitions.Agencia Nacional de Investigación e InnovaciónUnit of Integrative Microbiology of Zoonotic Agents IMiZA, Joint International Units program, Institut Pasteur/Institut Pasteur de Montevideo.engSpringer Naturehttps://hdl.handle.net/20.500.12381/602https://hdl.handle.net/20.500.12381/604Biophysical Reviewsreponame:IPMON en REDIinstname:Institut Pasteur de Montevideoinstacron:Institut Pasteur de MontevideoAlosterismoDinámica de proteínasSeñalización bacterianaRegulaciónFosforilaciónSistemas de dos componentesCiencias Naturales y ExactasCiencias BiológicasBioquímica y Biología MolecularBiología Celular, MicrobiologíaAllostery and protein plasticity: the keystones for bacterial signaling and regulationArtículoAceptadoinfo:eu-repo/semantics/acceptedVersioninfo:eu-repo/semantics/articleInstitut Pasteur de Montevideo//Ciencias Naturales y Exactas/Ciencias Biológicas/Bioquímica y Biología Molecular//Ciencias Naturales y Exactas/Ciencias Biológicas/Biología Celular, MicrobiologíaImelio, Juan AndresTrajtenberg, FelipeBuschiazzo, AlejandroLICENSElicense.txtlicense.txttext/plain; charset=utf-84746https://redi.anii.org.uy/jspui/bitstream/20.500.12381/603/2/license.txt2d97768b1a25a7df5a347bb58fd2d77fMD52ORIGINALImelio2021_BiophysRev.pdfImelio2021_BiophysRev.pdfBiophysical Reviews 2021application/pdf2445559https://redi.anii.org.uy/jspui/bitstream/20.500.12381/603/1/Imelio2021_BiophysRev.pdfdbdfb10c01c9a2871498c80f4efabc1fMD5120.500.12381/6032024-01-29 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en REDI - Institut Pasteur de Montevideofalse
spellingShingle Allostery and protein plasticity: the keystones for bacterial signaling and regulation
Imelio, Juan Andres
Alosterismo
Dinámica de proteínas
Señalización bacteriana
Regulación
Fosforilación
Sistemas de dos componentes
Ciencias Naturales y Exactas
Ciencias Biológicas
Bioquímica y Biología Molecular
Biología Celular, Microbiología
status_str acceptedVersion
title Allostery and protein plasticity: the keystones for bacterial signaling and regulation
title_full Allostery and protein plasticity: the keystones for bacterial signaling and regulation
title_fullStr Allostery and protein plasticity: the keystones for bacterial signaling and regulation
title_full_unstemmed Allostery and protein plasticity: the keystones for bacterial signaling and regulation
title_short Allostery and protein plasticity: the keystones for bacterial signaling and regulation
title_sort Allostery and protein plasticity: the keystones for bacterial signaling and regulation
topic Alosterismo
Dinámica de proteínas
Señalización bacteriana
Regulación
Fosforilación
Sistemas de dos componentes
Ciencias Naturales y Exactas
Ciencias Biológicas
Bioquímica y Biología Molecular
Biología Celular, Microbiología
url https://hdl.handle.net/20.500.12381/603
https://www.doi.org/10.1007/s12551-021-00892-9