Modeling missing pedigree with metafounders and validating single-step genomic predictions in a small dairy cattle population with a great influence of foreign genetics.
Resumen:
ABSTRACT.- Genetic improvement in small countries rely heavily on foreign genetics. In an importing country such as Uruguay, consideration of unknown parent groups (UPG) for foreign sires is essential. However, the use of UPG in genomic model evaluations may lead to bias in genomic estimated breeding values (GEBV). The objective of this study was to study different models including UPG or metafounders (MF) in the Uruguayan Holstein evaluation and to analyze bias, dispersion, and accuracy of GEBV predictions in BLUP and single-step genomic BLUP (ssGBLUP). © 2024, The Authors. Published by Elsevier Inc. on behalf of the American Dairy Science Association®
| 2024 | |
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Unknown parent groups Metafounders Bias Accuracy Imported genetics SISTEMA LECHERO - INIA |
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| Inglés | |
| Instituto Nacional de Investigación Agropecuaria | |
| AINFO | |
| https://ainfo.inia.uy/consulta/busca?b=pc&id=64727&biblioteca=vazio&busca=64727&qFacets=64727 | |
| Acceso abierto |
| _version_ | 1856772322902409216 |
|---|---|
| author | LÓPEZ-CORREA, R.D. |
| author2 | LEGARRA, A. AGUILAR, I. |
| author2_role | author author |
| author_facet | LÓPEZ-CORREA, R.D. LEGARRA, A. AGUILAR, I. |
| author_role | author |
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| bitstream.url.fl_str_mv | https://redi.anii.org.uy/jspui/bitstream/20.500.12381/4814/1/sword-2025-06-23T15%3a42%3a02.original.xml |
| collection | AINFO |
| dc.creator.none.fl_str_mv | LÓPEZ-CORREA, R.D. LEGARRA, A. AGUILAR, I. |
| dc.date.accessioned.none.fl_str_mv | 2025-06-23T18:42:02Z |
| dc.date.available.none.fl_str_mv | 2025-06-23T18:42:02Z |
| dc.date.issued.none.fl_str_mv | 2024 |
| dc.date.updated.none.fl_str_mv | 2025-06-23T18:42:02Z |
| dc.description.abstract.none.fl_txt_mv | ABSTRACT.- Genetic improvement in small countries rely heavily on foreign genetics. In an importing country such as Uruguay, consideration of unknown parent groups (UPG) for foreign sires is essential. However, the use of UPG in genomic model evaluations may lead to bias in genomic estimated breeding values (GEBV). The objective of this study was to study different models including UPG or metafounders (MF) in the Uruguayan Holstein evaluation and to analyze bias, dispersion, and accuracy of GEBV predictions in BLUP and single-step genomic BLUP (ssGBLUP). © 2024, The Authors. Published by Elsevier Inc. on behalf of the American Dairy Science Association® |
| dc.identifier.none.fl_str_mv | https://ainfo.inia.uy/consulta/busca?b=pc&id=64727&biblioteca=vazio&busca=64727&qFacets=64727 |
| dc.language.iso.none.fl_str_mv | en eng |
| dc.rights.es.fl_str_mv | Acceso abierto |
| dc.rights.none.fl_str_mv | info:eu-repo/semantics/openAccess |
| dc.source.none.fl_str_mv | reponame:AINFO instname:Instituto Nacional de Investigación Agropecuaria instacron:Instituto Nacional de Investigación Agropecuaria |
| dc.subject.none.fl_str_mv | Unknown parent groups Metafounders Bias Accuracy Imported genetics SISTEMA LECHERO - INIA |
| dc.title.none.fl_str_mv | Modeling missing pedigree with metafounders and validating single-step genomic predictions in a small dairy cattle population with a great influence of foreign genetics. |
| dc.type.none.fl_str_mv | Article PublishedVersion info:eu-repo/semantics/article |
| dc.type.version.none.fl_str_mv | info:eu-repo/semantics/publishedVersion |
| description | ABSTRACT.- Genetic improvement in small countries rely heavily on foreign genetics. In an importing country such as Uruguay, consideration of unknown parent groups (UPG) for foreign sires is essential. However, the use of UPG in genomic model evaluations may lead to bias in genomic estimated breeding values (GEBV). The objective of this study was to study different models including UPG or metafounders (MF) in the Uruguayan Holstein evaluation and to analyze bias, dispersion, and accuracy of GEBV predictions in BLUP and single-step genomic BLUP (ssGBLUP). © 2024, The Authors. Published by Elsevier Inc. on behalf of the American Dairy Science Association® |
| eu_rights_str_mv | openAccess |
| format | article |
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| instacron_str | Instituto Nacional de Investigación Agropecuaria |
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| instname_str | Instituto Nacional de Investigación Agropecuaria |
| language | eng |
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| oai_identifier_str | oai:redi.anii.org.uy:20.500.12381/4814 |
| publishDate | 2024 |
| reponame_str | AINFO |
| repository.mail.fl_str_mv | lorrego@inia.org.uy |
| repository.name.fl_str_mv | AINFO - Instituto Nacional de Investigación Agropecuaria |
| repository_id_str | |
| rights_invalid_str_mv | Acceso abierto |
| spelling | 2025-06-23T18:42:02Z2025-06-23T18:42:02Z20242025-06-23T18:42:02Zhttps://ainfo.inia.uy/consulta/busca?b=pc&id=64727&biblioteca=vazio&busca=64727&qFacets=64727ABSTRACT.- Genetic improvement in small countries rely heavily on foreign genetics. In an importing country such as Uruguay, consideration of unknown parent groups (UPG) for foreign sires is essential. However, the use of UPG in genomic model evaluations may lead to bias in genomic estimated breeding values (GEBV). The objective of this study was to study different models including UPG or metafounders (MF) in the Uruguayan Holstein evaluation and to analyze bias, dispersion, and accuracy of GEBV predictions in BLUP and single-step genomic BLUP (ssGBLUP). © 2024, The Authors. Published by Elsevier Inc. on behalf of the American Dairy Science Association®https://hdl.handle.net/20.500.12381/4814enenginfo:eu-repo/semantics/openAccessAcceso abiertoUnknown parent groupsMetafoundersBiasAccuracyImported geneticsSISTEMA LECHERO - INIAModeling missing pedigree with metafounders and validating single-step genomic predictions in a small dairy cattle population with a great influence of foreign genetics.ArticlePublishedVersioninfo:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionreponame:AINFOinstname:Instituto Nacional de Investigación Agropecuariainstacron:Instituto Nacional de Investigación AgropecuariaLÓPEZ-CORREA, R.D.LEGARRA, A.AGUILAR, I.SWORDsword-2025-06-23T15:42:02.original.xmlOriginal SWORD entry documentapplication/octet-stream1860https://redi.anii.org.uy/jspui/bitstream/20.500.12381/4814/1/sword-2025-06-23T15%3a42%3a02.original.xml78b5e73a4e456104ea071d333ccd904eMD5120.500.12381/48142026-02-10 15:54:00.941oai:redi.anii.org.uy:20.500.12381/4814Institucionalhttps://ainfo.inia.uy/Organismo científico-tecnológicohttp://inia.uyhttps://redi.anii.org.uy/oai/requestlorrego@inia.org.uyUruguayopendoar:2026-02-10T18:54AINFO - Instituto Nacional de Investigación Agropecuariafalse |
| spellingShingle | Modeling missing pedigree with metafounders and validating single-step genomic predictions in a small dairy cattle population with a great influence of foreign genetics. LÓPEZ-CORREA, R.D. Unknown parent groups Metafounders Bias Accuracy Imported genetics SISTEMA LECHERO - INIA |
| status_str | publishedVersion |
| title | Modeling missing pedigree with metafounders and validating single-step genomic predictions in a small dairy cattle population with a great influence of foreign genetics. |
| title_full | Modeling missing pedigree with metafounders and validating single-step genomic predictions in a small dairy cattle population with a great influence of foreign genetics. |
| title_fullStr | Modeling missing pedigree with metafounders and validating single-step genomic predictions in a small dairy cattle population with a great influence of foreign genetics. |
| title_full_unstemmed | Modeling missing pedigree with metafounders and validating single-step genomic predictions in a small dairy cattle population with a great influence of foreign genetics. |
| title_short | Modeling missing pedigree with metafounders and validating single-step genomic predictions in a small dairy cattle population with a great influence of foreign genetics. |
| title_sort | Modeling missing pedigree with metafounders and validating single-step genomic predictions in a small dairy cattle population with a great influence of foreign genetics. |
| topic | Unknown parent groups Metafounders Bias Accuracy Imported genetics SISTEMA LECHERO - INIA |
| url | https://ainfo.inia.uy/consulta/busca?b=pc&id=64727&biblioteca=vazio&busca=64727&qFacets=64727 |
