PREGSF90 - POSTGSF90: Computational tools for the implementation of single-step genomic selection and genome-wide association with ungenotyped individuals in BLUPF90 programs.
Resumen:
ABSTRACT.Single step genomic methodology provides a unified framework to integrate phenotypic, pedigree and genomic information in prediction of breeding values for all individuals and in estimation of marker effects. Computational tools for the implementation of the single-step methodology are presented. Methodology, quality control of samples and different options to create genomic relationship matrices are discussed. Computing time for construction and inversion of genomic relationship matrices and large-scale genome-wide association study for heat tolerance in milk yield are presented.
| 2014 | |
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Genomic selection SsGBLUP Genome-wide association Genomic relationship matrix |
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| Inglés | |
| Instituto Nacional de Investigación Agropecuaria | |
| AINFO | |
| http://www.ainfo.inia.uy/consulta/busca?b=pc&id=61921&biblioteca=vazio&busca=61921&qFacets=61921 | |
| Acceso abierto |
| _version_ | 1805580525913505792 |
|---|---|
| author | AGUILAR, I. |
| author2 | MISZTAL, I. TSURUTA, S. LEGARRA, A. WANG, H. |
| author2_role | author author author author |
| author_facet | AGUILAR, I. MISZTAL, I. TSURUTA, S. LEGARRA, A. WANG, H. |
| author_role | author |
| bitstream.checksum.fl_str_mv | 19e523423ddb0804fe64e92cc63894b3 |
| bitstream.checksumAlgorithm.fl_str_mv | MD5 |
| bitstream.url.fl_str_mv | https://redi.anii.org.uy/jspui/bitstream/20.500.12381/1730/1/sword-2022-10-20T22%3a48%3a58.original.xml |
| collection | AINFO |
| dc.creator.none.fl_str_mv | AGUILAR, I. MISZTAL, I. TSURUTA, S. LEGARRA, A. WANG, H. |
| dc.date.accessioned.none.fl_str_mv | 2022-10-21T01:48:58Z |
| dc.date.available.none.fl_str_mv | 2022-10-21T01:48:58Z |
| dc.date.issued.none.fl_str_mv | 2014 |
| dc.date.updated.none.fl_str_mv | 2022-10-21T01:48:58Z |
| dc.description.abstract.none.fl_txt_mv | ABSTRACT.Single step genomic methodology provides a unified framework to integrate phenotypic, pedigree and genomic information in prediction of breeding values for all individuals and in estimation of marker effects. Computational tools for the implementation of the single-step methodology are presented. Methodology, quality control of samples and different options to create genomic relationship matrices are discussed. Computing time for construction and inversion of genomic relationship matrices and large-scale genome-wide association study for heat tolerance in milk yield are presented. |
| dc.identifier.none.fl_str_mv | http://www.ainfo.inia.uy/consulta/busca?b=pc&id=61921&biblioteca=vazio&busca=61921&qFacets=61921 |
| dc.language.iso.none.fl_str_mv | en eng |
| dc.rights.es.fl_str_mv | Acceso abierto |
| dc.rights.none.fl_str_mv | info:eu-repo/semantics/openAccess |
| dc.source.none.fl_str_mv | reponame:AINFO instname:Instituto Nacional de Investigación Agropecuaria instacron:Instituto Nacional de Investigación Agropecuaria |
| dc.subject.none.fl_str_mv | Genomic selection SsGBLUP Genome-wide association Genomic relationship matrix |
| dc.title.none.fl_str_mv | PREGSF90 - POSTGSF90: Computational tools for the implementation of single-step genomic selection and genome-wide association with ungenotyped individuals in BLUPF90 programs. |
| dc.type.none.fl_str_mv | ConferenceObject PublishedVersion info:eu-repo/semantics/conferenceObject |
| dc.type.version.none.fl_str_mv | info:eu-repo/semantics/publishedVersion |
| description | ABSTRACT.Single step genomic methodology provides a unified framework to integrate phenotypic, pedigree and genomic information in prediction of breeding values for all individuals and in estimation of marker effects. Computational tools for the implementation of the single-step methodology are presented. Methodology, quality control of samples and different options to create genomic relationship matrices are discussed. Computing time for construction and inversion of genomic relationship matrices and large-scale genome-wide association study for heat tolerance in milk yield are presented. |
| eu_rights_str_mv | openAccess |
| format | conferenceObject |
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| instacron_str | Instituto Nacional de Investigación Agropecuaria |
| institution | Instituto Nacional de Investigación Agropecuaria |
| instname_str | Instituto Nacional de Investigación Agropecuaria |
| language | eng |
| language_invalid_str_mv | en |
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| oai_identifier_str | oai:redi.anii.org.uy:20.500.12381/1730 |
| publishDate | 2014 |
| reponame_str | AINFO |
| repository.mail.fl_str_mv | lorrego@inia.org.uy |
| repository.name.fl_str_mv | AINFO - Instituto Nacional de Investigación Agropecuaria |
| repository_id_str | |
| rights_invalid_str_mv | Acceso abierto |
| spelling | 2022-10-21T01:48:58Z2022-10-21T01:48:58Z20142022-10-21T01:48:58Zhttp://www.ainfo.inia.uy/consulta/busca?b=pc&id=61921&biblioteca=vazio&busca=61921&qFacets=61921ABSTRACT.Single step genomic methodology provides a unified framework to integrate phenotypic, pedigree and genomic information in prediction of breeding values for all individuals and in estimation of marker effects. Computational tools for the implementation of the single-step methodology are presented. Methodology, quality control of samples and different options to create genomic relationship matrices are discussed. Computing time for construction and inversion of genomic relationship matrices and large-scale genome-wide association study for heat tolerance in milk yield are presented.https://hdl.handle.net/20.500.12381/1730enenginfo:eu-repo/semantics/openAccessAcceso abiertoGenomic selectionSsGBLUPGenome-wide associationGenomic relationship matrixPREGSF90 - POSTGSF90: Computational tools for the implementation of single-step genomic selection and genome-wide association with ungenotyped individuals in BLUPF90 programs.ConferenceObjectPublishedVersioninfo:eu-repo/semantics/conferenceObjectinfo:eu-repo/semantics/publishedVersionreponame:AINFOinstname:Instituto Nacional de Investigación Agropecuariainstacron:Instituto Nacional de Investigación AgropecuariaAGUILAR, I.MISZTAL, I.TSURUTA, S.LEGARRA, A.WANG, H.SWORDsword-2022-10-20T22:48:58.original.xmlOriginal SWORD entry documentapplication/octet-stream1809https://redi.anii.org.uy/jspui/bitstream/20.500.12381/1730/1/sword-2022-10-20T22%3a48%3a58.original.xml19e523423ddb0804fe64e92cc63894b3MD5120.500.12381/17302022-10-20 22:48:58.312oai:redi.anii.org.uy:20.500.12381/1730Gobiernohttp://inia.uyhttps://redi.anii.org.uy/oai/requestlorrego@inia.org.uyUruguayopendoar:2022-10-21T01:48:58AINFO - Instituto Nacional de Investigación Agropecuariafalse |
| spellingShingle | PREGSF90 - POSTGSF90: Computational tools for the implementation of single-step genomic selection and genome-wide association with ungenotyped individuals in BLUPF90 programs. AGUILAR, I. Genomic selection SsGBLUP Genome-wide association Genomic relationship matrix |
| status_str | publishedVersion |
| title | PREGSF90 - POSTGSF90: Computational tools for the implementation of single-step genomic selection and genome-wide association with ungenotyped individuals in BLUPF90 programs. |
| title_full | PREGSF90 - POSTGSF90: Computational tools for the implementation of single-step genomic selection and genome-wide association with ungenotyped individuals in BLUPF90 programs. |
| title_fullStr | PREGSF90 - POSTGSF90: Computational tools for the implementation of single-step genomic selection and genome-wide association with ungenotyped individuals in BLUPF90 programs. |
| title_full_unstemmed | PREGSF90 - POSTGSF90: Computational tools for the implementation of single-step genomic selection and genome-wide association with ungenotyped individuals in BLUPF90 programs. |
| title_short | PREGSF90 - POSTGSF90: Computational tools for the implementation of single-step genomic selection and genome-wide association with ungenotyped individuals in BLUPF90 programs. |
| title_sort | PREGSF90 - POSTGSF90: Computational tools for the implementation of single-step genomic selection and genome-wide association with ungenotyped individuals in BLUPF90 programs. |
| topic | Genomic selection SsGBLUP Genome-wide association Genomic relationship matrix |
| url | http://www.ainfo.inia.uy/consulta/busca?b=pc&id=61921&biblioteca=vazio&busca=61921&qFacets=61921 |
