Crystal structure of Trypanosoma cruzi heme peroxidase and characterization of its substrate specificity and compound I intermediate
Resumen:
The protozoan parasite Trypanosoma cruzi is the causative agent of American trypanosomiasis, otherwise known as Chagas disease. To survive in the host, the T. cruzi parasite needs antioxidant defense systems. One of these is a hybrid heme peroxidase, the T. cruzi ascorbate peroxidase-cytochrome c peroxidase enzyme (TcAPx-CcP). TcAPx-CcP has high sequence identity to members of the class I peroxidase family, notably ascorbate peroxidase (APX) and cytochrome c peroxidase (CcP), as well as a mitochondrial peroxidase from Leishmania major (LmP). The aim of this work was to solve the structure and examine the reactivity of the TcAPx-CcP enzyme. Low temperature electron paramagnetic resonance spectra support the formation of an exchange-coupled [Fe(IV)=O Trp233•+] compound I radical species, analogous to that used in CcP and LmP. We demonstrate that TcAPx-CcP is similar in overall structure to APX and CcP, but there are differences in the substrate-binding regions. Furthermore, the electron transfer pathway from cytochrome c to the heme in CcP and LmP is preserved in the TcAPx-CcP structure. Integration of steady state kinetic experiments, molecular dynamic simulations, and bioinformatic analyses indicates that TcAPx-CcP preferentially oxidizes cytochrome c but is still competent for oxidization of ascorbate. The results reveal that TcAPx-CcP is a credible cytochrome c peroxidase, which can also bind and use ascorbate in host cells, where concentrations are in the millimolar range. Thus, kinetically and functionally TcAPx-CcP can be considered a hybrid peroxidase.
2022 | |
Peroxidase Chagas disease Ascorbate Cytochrome C. Heme Oxidants |
|
Inglés | |
Universidad de la República | |
COLIBRI | |
https://hdl.handle.net/20.500.12008/38476 | |
Acceso abierto | |
Licencia Creative Commons Atribución (CC - By 4.0) |
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author | Freeman, Samuel L. |
author2 | Skafar Amen, Vera Kwon, Hanna Fielding, Alistair J. Moody, Peter C. E. Martínez, Alejandra Issoglio, Federico M. Inchausti, Lucas Smircich, Pablo Zeida, Ari Piacenza, Lucía Radi, Rafael Raven, Emma L. |
author2_role | author author author author author author author author author author author author |
author_facet | Freeman, Samuel L. Skafar Amen, Vera Kwon, Hanna Fielding, Alistair J. Moody, Peter C. E. Martínez, Alejandra Issoglio, Federico M. Inchausti, Lucas Smircich, Pablo Zeida, Ari Piacenza, Lucía Radi, Rafael Raven, Emma L. |
author_role | author |
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collection | COLIBRI |
dc.contributor.filiacion.none.fl_str_mv | Freeman Samuel L. Skafar Amen Vera, Universidad de la República (Uruguay). Facultad de Medicina. Kwon Hanna Fielding Alistair J. Moody Peter C. E. Martínez Alejandra, Universidad de la República (Uruguay). Facultad de Medicina. Issoglio Federico M. Inchausti Lucas, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Biología. Smircich Pablo, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Biología. Zeida Ari, Universidad de la República (Uruguay). Facultad de Medicina. Piacenza Lucía, Universidad de la República (Uruguay). Facultad de Medicina. Radi Rafael, Universidad de la República (Uruguay). Facultad de Medicina. Raven Emma L. |
dc.creator.none.fl_str_mv | Freeman, Samuel L. Skafar Amen, Vera Kwon, Hanna Fielding, Alistair J. Moody, Peter C. E. Martínez, Alejandra Issoglio, Federico M. Inchausti, Lucas Smircich, Pablo Zeida, Ari Piacenza, Lucía Radi, Rafael Raven, Emma L. |
dc.date.accessioned.none.fl_str_mv | 2023-07-27T14:05:47Z |
dc.date.available.none.fl_str_mv | 2023-07-27T14:05:47Z |
dc.date.issued.none.fl_str_mv | 2022 |
dc.description.abstract.none.fl_txt_mv | The protozoan parasite Trypanosoma cruzi is the causative agent of American trypanosomiasis, otherwise known as Chagas disease. To survive in the host, the T. cruzi parasite needs antioxidant defense systems. One of these is a hybrid heme peroxidase, the T. cruzi ascorbate peroxidase-cytochrome c peroxidase enzyme (TcAPx-CcP). TcAPx-CcP has high sequence identity to members of the class I peroxidase family, notably ascorbate peroxidase (APX) and cytochrome c peroxidase (CcP), as well as a mitochondrial peroxidase from Leishmania major (LmP). The aim of this work was to solve the structure and examine the reactivity of the TcAPx-CcP enzyme. Low temperature electron paramagnetic resonance spectra support the formation of an exchange-coupled [Fe(IV)=O Trp233•+] compound I radical species, analogous to that used in CcP and LmP. We demonstrate that TcAPx-CcP is similar in overall structure to APX and CcP, but there are differences in the substrate-binding regions. Furthermore, the electron transfer pathway from cytochrome c to the heme in CcP and LmP is preserved in the TcAPx-CcP structure. Integration of steady state kinetic experiments, molecular dynamic simulations, and bioinformatic analyses indicates that TcAPx-CcP preferentially oxidizes cytochrome c but is still competent for oxidization of ascorbate. The results reveal that TcAPx-CcP is a credible cytochrome c peroxidase, which can also bind and use ascorbate in host cells, where concentrations are in the millimolar range. Thus, kinetically and functionally TcAPx-CcP can be considered a hybrid peroxidase. |
dc.format.extent.es.fl_str_mv | 10 h. |
dc.format.mimetype.es.fl_str_mv | application/pdf |
dc.identifier.citation.es.fl_str_mv | Freeman, S, Skafar Amen, V, Kwon, H, [y otros autores]. "Crystal structure of Trypanosoma cruzi heme peroxidase and characterization of its substrate specificity and compound I intermediate". Journal of Biological Chemistry. [en línea] 2022, 298(8): 102204. 10 h. DOI: 10.1016/j.jbc.2022.102204 |
dc.identifier.doi.none.fl_str_mv | 10.1016/j.jbc.2022.102204 |
dc.identifier.issn.none.fl_str_mv | 0021-9258 |
dc.identifier.uri.none.fl_str_mv | https://hdl.handle.net/20.500.12008/38476 |
dc.language.iso.none.fl_str_mv | en_US eng |
dc.publisher.es.fl_str_mv | Elsevier Inc. |
dc.relation.ispartof.es.fl_str_mv | Journal of Biological Chemistry, 2022, 298(8): 102204. |
dc.rights.license.none.fl_str_mv | Licencia Creative Commons Atribución (CC - By 4.0) |
dc.rights.none.fl_str_mv | info:eu-repo/semantics/openAccess |
dc.source.none.fl_str_mv | reponame:COLIBRI instname:Universidad de la República instacron:Universidad de la República |
dc.subject.es.fl_str_mv | Peroxidase Chagas disease Ascorbate Cytochrome C. Heme Oxidants |
dc.title.none.fl_str_mv | Crystal structure of Trypanosoma cruzi heme peroxidase and characterization of its substrate specificity and compound I intermediate |
dc.type.es.fl_str_mv | Artículo |
dc.type.none.fl_str_mv | info:eu-repo/semantics/article |
dc.type.version.none.fl_str_mv | info:eu-repo/semantics/publishedVersion |
description | The protozoan parasite Trypanosoma cruzi is the causative agent of American trypanosomiasis, otherwise known as Chagas disease. To survive in the host, the T. cruzi parasite needs antioxidant defense systems. One of these is a hybrid heme peroxidase, the T. cruzi ascorbate peroxidase-cytochrome c peroxidase enzyme (TcAPx-CcP). TcAPx-CcP has high sequence identity to members of the class I peroxidase family, notably ascorbate peroxidase (APX) and cytochrome c peroxidase (CcP), as well as a mitochondrial peroxidase from Leishmania major (LmP). The aim of this work was to solve the structure and examine the reactivity of the TcAPx-CcP enzyme. Low temperature electron paramagnetic resonance spectra support the formation of an exchange-coupled [Fe(IV)=O Trp233•+] compound I radical species, analogous to that used in CcP and LmP. We demonstrate that TcAPx-CcP is similar in overall structure to APX and CcP, but there are differences in the substrate-binding regions. Furthermore, the electron transfer pathway from cytochrome c to the heme in CcP and LmP is preserved in the TcAPx-CcP structure. Integration of steady state kinetic experiments, molecular dynamic simulations, and bioinformatic analyses indicates that TcAPx-CcP preferentially oxidizes cytochrome c but is still competent for oxidization of ascorbate. The results reveal that TcAPx-CcP is a credible cytochrome c peroxidase, which can also bind and use ascorbate in host cells, where concentrations are in the millimolar range. Thus, kinetically and functionally TcAPx-CcP can be considered a hybrid peroxidase. |
eu_rights_str_mv | openAccess |
format | article |
id | COLIBRI_ea3d6ff7fb0969193dc633070e837adf |
identifier_str_mv | Freeman, S, Skafar Amen, V, Kwon, H, [y otros autores]. "Crystal structure of Trypanosoma cruzi heme peroxidase and characterization of its substrate specificity and compound I intermediate". Journal of Biological Chemistry. [en línea] 2022, 298(8): 102204. 10 h. DOI: 10.1016/j.jbc.2022.102204 0021-9258 10.1016/j.jbc.2022.102204 |
instacron_str | Universidad de la República |
institution | Universidad de la República |
instname_str | Universidad de la República |
language | eng |
language_invalid_str_mv | en_US |
network_acronym_str | COLIBRI |
network_name_str | COLIBRI |
oai_identifier_str | oai:colibri.udelar.edu.uy:20.500.12008/38476 |
publishDate | 2022 |
reponame_str | COLIBRI |
repository.mail.fl_str_mv | mabel.seroubian@seciu.edu.uy |
repository.name.fl_str_mv | COLIBRI - Universidad de la República |
repository_id_str | 4771 |
rights_invalid_str_mv | Licencia Creative Commons Atribución (CC - By 4.0) |
spelling | Freeman Samuel L.Skafar Amen Vera, Universidad de la República (Uruguay). Facultad de Medicina.Kwon HannaFielding Alistair J.Moody Peter C. E.Martínez Alejandra, Universidad de la República (Uruguay). Facultad de Medicina.Issoglio Federico M.Inchausti Lucas, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Biología.Smircich Pablo, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Biología.Zeida Ari, Universidad de la República (Uruguay). Facultad de Medicina.Piacenza Lucía, Universidad de la República (Uruguay). Facultad de Medicina.Radi Rafael, Universidad de la República (Uruguay). Facultad de Medicina.Raven Emma L.2023-07-27T14:05:47Z2023-07-27T14:05:47Z2022Freeman, S, Skafar Amen, V, Kwon, H, [y otros autores]. "Crystal structure of Trypanosoma cruzi heme peroxidase and characterization of its substrate specificity and compound I intermediate". Journal of Biological Chemistry. [en línea] 2022, 298(8): 102204. 10 h. DOI: 10.1016/j.jbc.2022.1022040021-9258https://hdl.handle.net/20.500.12008/3847610.1016/j.jbc.2022.102204The protozoan parasite Trypanosoma cruzi is the causative agent of American trypanosomiasis, otherwise known as Chagas disease. To survive in the host, the T. cruzi parasite needs antioxidant defense systems. One of these is a hybrid heme peroxidase, the T. cruzi ascorbate peroxidase-cytochrome c peroxidase enzyme (TcAPx-CcP). TcAPx-CcP has high sequence identity to members of the class I peroxidase family, notably ascorbate peroxidase (APX) and cytochrome c peroxidase (CcP), as well as a mitochondrial peroxidase from Leishmania major (LmP). The aim of this work was to solve the structure and examine the reactivity of the TcAPx-CcP enzyme. Low temperature electron paramagnetic resonance spectra support the formation of an exchange-coupled [Fe(IV)=O Trp233•+] compound I radical species, analogous to that used in CcP and LmP. We demonstrate that TcAPx-CcP is similar in overall structure to APX and CcP, but there are differences in the substrate-binding regions. Furthermore, the electron transfer pathway from cytochrome c to the heme in CcP and LmP is preserved in the TcAPx-CcP structure. Integration of steady state kinetic experiments, molecular dynamic simulations, and bioinformatic analyses indicates that TcAPx-CcP preferentially oxidizes cytochrome c but is still competent for oxidization of ascorbate. The results reveal that TcAPx-CcP is a credible cytochrome c peroxidase, which can also bind and use ascorbate in host cells, where concentrations are in the millimolar range. Thus, kinetically and functionally TcAPx-CcP can be considered a hybrid peroxidase.Submitted by Farías Verónica (vfarias@fcien.edu.uy) on 2023-07-26T13:54:03Z No. of bitstreams: 2 license_rdf: 19875 bytes, checksum: 9fdbed07f52437945402c4e70fa4773e (MD5) 01016jjbc2022102204.pdf: 2060847 bytes, checksum: 25384f355d25f1101dce50b7396866fe (MD5)Approved for entry into archive by Faget Cecilia (lfaget@fcien.edu.uy) on 2023-07-26T14:51:22Z (GMT) No. of bitstreams: 2 license_rdf: 19875 bytes, checksum: 9fdbed07f52437945402c4e70fa4773e (MD5) 01016jjbc2022102204.pdf: 2060847 bytes, checksum: 25384f355d25f1101dce50b7396866fe (MD5)Made available in DSpace by Luna Fabiana (fabiana.luna@seciu.edu.uy) on 2023-07-27T14:05:47Z (GMT). No. of bitstreams: 2 license_rdf: 19875 bytes, checksum: 9fdbed07f52437945402c4e70fa4773e (MD5) 01016jjbc2022102204.pdf: 2060847 bytes, checksum: 25384f355d25f1101dce50b7396866fe (MD5) Previous issue date: 202210 h.application/pdfen_USengElsevier Inc.Journal of Biological Chemistry, 2022, 298(8): 102204.Las obras depositadas en el Repositorio se rigen por la Ordenanza de los Derechos de la Propiedad Intelectual de la Universidad de la República.(Res. Nº 91 de C.D.C. de 8/III/1994 – D.O. 7/IV/1994) y por la Ordenanza del Repositorio Abierto de la Universidad de la República (Res. Nº 16 de C.D.C. de 07/10/2014)info:eu-repo/semantics/openAccessLicencia Creative Commons Atribución (CC - By 4.0)PeroxidaseChagas diseaseAscorbateCytochrome C.HemeOxidantsCrystal structure of Trypanosoma cruzi heme peroxidase and characterization of its substrate specificity and compound I intermediateArtículoinfo:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionreponame:COLIBRIinstname:Universidad de la Repúblicainstacron:Universidad de la RepúblicaFreeman, Samuel L.Skafar Amen, VeraKwon, HannaFielding, Alistair J.Moody, Peter C. 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- Universidad de la Repúblicafalse |
spellingShingle | Crystal structure of Trypanosoma cruzi heme peroxidase and characterization of its substrate specificity and compound I intermediate Freeman, Samuel L. Peroxidase Chagas disease Ascorbate Cytochrome C. Heme Oxidants |
status_str | publishedVersion |
title | Crystal structure of Trypanosoma cruzi heme peroxidase and characterization of its substrate specificity and compound I intermediate |
title_full | Crystal structure of Trypanosoma cruzi heme peroxidase and characterization of its substrate specificity and compound I intermediate |
title_fullStr | Crystal structure of Trypanosoma cruzi heme peroxidase and characterization of its substrate specificity and compound I intermediate |
title_full_unstemmed | Crystal structure of Trypanosoma cruzi heme peroxidase and characterization of its substrate specificity and compound I intermediate |
title_short | Crystal structure of Trypanosoma cruzi heme peroxidase and characterization of its substrate specificity and compound I intermediate |
title_sort | Crystal structure of Trypanosoma cruzi heme peroxidase and characterization of its substrate specificity and compound I intermediate |
topic | Peroxidase Chagas disease Ascorbate Cytochrome C. Heme Oxidants |
url | https://hdl.handle.net/20.500.12008/38476 |