Characterization of the cellulase-secretome produced by the Antarctic bacterium Flavobacterium sp. AUG42
Resumen:
Flavobacterium sp. AUG42 is a cellulase-producing bacterium isolated from the Antarctic oligochaete Grania sp. (Annelida). In this work, we report that AUG42 produces a glycoside hydrolase cocktail with CMCase, PASCase and cellobiase activities (optimum pHs and temperatures ranging from 5.5 to 6.5 and 40 to 50 °C, respectively). The time-course analyses of the bacterial growth and cellulase production showed that the cocktail has maximal activity at the stationary phase when growing at 16 °C with filter paper as a cellulosic carbon source, among the tested substrates. The analyses of the CAZome and the identification of secreted proteins by shotgun Mass Spectrometry analysis showed that five glycoside hydrolyses are present in the bacterial secretome, which probably cooperate in the degradation of the cellulosic substrates. Two of these glycoside hydrolyses may harbor putative carbohydrate binding modules, both with a cleft-like active site. The cellulolytic cocktail was assayed in saccharification experiments using carboxymethylcellulose as a substrate and results showed the release of glucose (a fermentable sugar) and other reducing-sugars, after 24 h incubation. The ecological relevance of producing cellulases in the Antarctic environment, as well as their potential use in the bio-refinery industry, are discussed.
2019 | |
Antarctica Carbon cycle Cellulase Flavobacterium Saccharification |
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Inglés | |
Universidad de la República | |
COLIBRI | |
https://hdl.handle.net/20.500.12008/27228 | |
Acceso abierto | |
Licencia Creative Commons Atribución - No Comercial - Sin Derivadas (CC - By-NC-ND 4.0) |
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---|---|
author | Herrera, Lorena |
author2 | Braña, Victoria Franco-Fraguas, Laura Castro-Sowinski, Susana |
author2_role | author author author |
author_facet | Herrera, Lorena Braña, Victoria Franco-Fraguas, Laura Castro-Sowinski, Susana |
author_role | author |
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collection | COLIBRI |
dc.contributor.filiacion.none.fl_str_mv | Herrera Lorena, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Biología. Braña Victoria, IIBCE Franco-Fraguas Laura, Universidad de la República (Uruguay). Facultad de Química. Castro-Sowinski Susana, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Biología. |
dc.creator.none.fl_str_mv | Herrera, Lorena Braña, Victoria Franco-Fraguas, Laura Castro-Sowinski, Susana |
dc.date.accessioned.none.fl_str_mv | 2021-04-23T14:25:28Z |
dc.date.available.none.fl_str_mv | 2021-04-23T14:25:28Z |
dc.date.issued.none.fl_str_mv | 2019 |
dc.description.abstract.none.fl_txt_mv | Flavobacterium sp. AUG42 is a cellulase-producing bacterium isolated from the Antarctic oligochaete Grania sp. (Annelida). In this work, we report that AUG42 produces a glycoside hydrolase cocktail with CMCase, PASCase and cellobiase activities (optimum pHs and temperatures ranging from 5.5 to 6.5 and 40 to 50 °C, respectively). The time-course analyses of the bacterial growth and cellulase production showed that the cocktail has maximal activity at the stationary phase when growing at 16 °C with filter paper as a cellulosic carbon source, among the tested substrates. The analyses of the CAZome and the identification of secreted proteins by shotgun Mass Spectrometry analysis showed that five glycoside hydrolyses are present in the bacterial secretome, which probably cooperate in the degradation of the cellulosic substrates. Two of these glycoside hydrolyses may harbor putative carbohydrate binding modules, both with a cleft-like active site. The cellulolytic cocktail was assayed in saccharification experiments using carboxymethylcellulose as a substrate and results showed the release of glucose (a fermentable sugar) and other reducing-sugars, after 24 h incubation. The ecological relevance of producing cellulases in the Antarctic environment, as well as their potential use in the bio-refinery industry, are discussed. |
dc.format.extent.es.fl_str_mv | 9 h. |
dc.format.mimetype.es.fl_str_mv | application/pdf |
dc.identifier.citation.es.fl_str_mv | Herrera, L, Braña, V, Franco-Fraguas, L. y otros. "Characterization of the cellulase-secretome produced by the Antarctic bacterium Flavobacterium sp. AUG42". Microbiological Research. [en línea] 2019, 223-225:13-23. 9 h. DOI: 10.1016/j.micres.2019.03.009 |
dc.identifier.doi.none.fl_str_mv | 10.1016/j.micres.2019.03.009 |
dc.identifier.issn.none.fl_str_mv | 0944-5013 |
dc.identifier.uri.none.fl_str_mv | https://hdl.handle.net/20.500.12008/27228 |
dc.language.iso.none.fl_str_mv | en eng |
dc.publisher.es.fl_str_mv | Urban and Fischer |
dc.relation.ispartof.es.fl_str_mv | Microbiological Research, 2019, 223-225: 13-23 |
dc.rights.license.none.fl_str_mv | Licencia Creative Commons Atribución - No Comercial - Sin Derivadas (CC - By-NC-ND 4.0) |
dc.rights.none.fl_str_mv | info:eu-repo/semantics/openAccess |
dc.source.none.fl_str_mv | reponame:COLIBRI instname:Universidad de la República instacron:Universidad de la República |
dc.subject.es.fl_str_mv | Antarctica Carbon cycle Cellulase Flavobacterium Saccharification |
dc.title.none.fl_str_mv | Characterization of the cellulase-secretome produced by the Antarctic bacterium Flavobacterium sp. AUG42 |
dc.type.es.fl_str_mv | Artículo |
dc.type.none.fl_str_mv | info:eu-repo/semantics/article |
dc.type.version.none.fl_str_mv | info:eu-repo/semantics/publishedVersion |
description | Flavobacterium sp. AUG42 is a cellulase-producing bacterium isolated from the Antarctic oligochaete Grania sp. (Annelida). In this work, we report that AUG42 produces a glycoside hydrolase cocktail with CMCase, PASCase and cellobiase activities (optimum pHs and temperatures ranging from 5.5 to 6.5 and 40 to 50 °C, respectively). The time-course analyses of the bacterial growth and cellulase production showed that the cocktail has maximal activity at the stationary phase when growing at 16 °C with filter paper as a cellulosic carbon source, among the tested substrates. The analyses of the CAZome and the identification of secreted proteins by shotgun Mass Spectrometry analysis showed that five glycoside hydrolyses are present in the bacterial secretome, which probably cooperate in the degradation of the cellulosic substrates. Two of these glycoside hydrolyses may harbor putative carbohydrate binding modules, both with a cleft-like active site. The cellulolytic cocktail was assayed in saccharification experiments using carboxymethylcellulose as a substrate and results showed the release of glucose (a fermentable sugar) and other reducing-sugars, after 24 h incubation. The ecological relevance of producing cellulases in the Antarctic environment, as well as their potential use in the bio-refinery industry, are discussed. |
eu_rights_str_mv | openAccess |
format | article |
id | COLIBRI_d954204b7124e34ef292d00a7c98a3a2 |
identifier_str_mv | Herrera, L, Braña, V, Franco-Fraguas, L. y otros. "Characterization of the cellulase-secretome produced by the Antarctic bacterium Flavobacterium sp. AUG42". Microbiological Research. [en línea] 2019, 223-225:13-23. 9 h. DOI: 10.1016/j.micres.2019.03.009 0944-5013 10.1016/j.micres.2019.03.009 |
instacron_str | Universidad de la República |
institution | Universidad de la República |
instname_str | Universidad de la República |
language | eng |
language_invalid_str_mv | en |
network_acronym_str | COLIBRI |
network_name_str | COLIBRI |
oai_identifier_str | oai:colibri.udelar.edu.uy:20.500.12008/27228 |
publishDate | 2019 |
reponame_str | COLIBRI |
repository.mail.fl_str_mv | mabel.seroubian@seciu.edu.uy |
repository.name.fl_str_mv | COLIBRI - Universidad de la República |
repository_id_str | 4771 |
rights_invalid_str_mv | Licencia Creative Commons Atribución - No Comercial - Sin Derivadas (CC - By-NC-ND 4.0) |
spelling | Herrera Lorena, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Biología.Braña Victoria, IIBCEFranco-Fraguas Laura, Universidad de la República (Uruguay). Facultad de Química.Castro-Sowinski Susana, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Biología.2021-04-23T14:25:28Z2021-04-23T14:25:28Z2019Herrera, L, Braña, V, Franco-Fraguas, L. y otros. "Characterization of the cellulase-secretome produced by the Antarctic bacterium Flavobacterium sp. AUG42". Microbiological Research. [en línea] 2019, 223-225:13-23. 9 h. DOI: 10.1016/j.micres.2019.03.0090944-5013https://hdl.handle.net/20.500.12008/2722810.1016/j.micres.2019.03.009Flavobacterium sp. AUG42 is a cellulase-producing bacterium isolated from the Antarctic oligochaete Grania sp. (Annelida). In this work, we report that AUG42 produces a glycoside hydrolase cocktail with CMCase, PASCase and cellobiase activities (optimum pHs and temperatures ranging from 5.5 to 6.5 and 40 to 50 °C, respectively). The time-course analyses of the bacterial growth and cellulase production showed that the cocktail has maximal activity at the stationary phase when growing at 16 °C with filter paper as a cellulosic carbon source, among the tested substrates. The analyses of the CAZome and the identification of secreted proteins by shotgun Mass Spectrometry analysis showed that five glycoside hydrolyses are present in the bacterial secretome, which probably cooperate in the degradation of the cellulosic substrates. Two of these glycoside hydrolyses may harbor putative carbohydrate binding modules, both with a cleft-like active site. The cellulolytic cocktail was assayed in saccharification experiments using carboxymethylcellulose as a substrate and results showed the release of glucose (a fermentable sugar) and other reducing-sugars, after 24 h incubation. The ecological relevance of producing cellulases in the Antarctic environment, as well as their potential use in the bio-refinery industry, are discussed.Submitted by Verdun Juan Pablo (jverdun@fcien.edu.uy) on 2021-04-22T16:37:23Z No. of bitstreams: 2 license_rdf: 23149 bytes, checksum: 1996b8461bc290aef6a27d78c67b6b52 (MD5) 10.1016j.micres.2019.03.009.pdf: 1576758 bytes, checksum: e38598624909d5af9382add3bfd6b776 (MD5)Approved for entry into archive by Faget Cecilia (lfaget@fcien.edu.uy) on 2021-04-23T14:11:56Z (GMT) No. of bitstreams: 2 license_rdf: 23149 bytes, checksum: 1996b8461bc290aef6a27d78c67b6b52 (MD5) 10.1016j.micres.2019.03.009.pdf: 1576758 bytes, checksum: e38598624909d5af9382add3bfd6b776 (MD5)Made available in DSpace by Luna Fabiana (fabiana.luna@seciu.edu.uy) on 2021-04-23T14:25:28Z (GMT). No. of bitstreams: 2 license_rdf: 23149 bytes, checksum: 1996b8461bc290aef6a27d78c67b6b52 (MD5) 10.1016j.micres.2019.03.009.pdf: 1576758 bytes, checksum: e38598624909d5af9382add3bfd6b776 (MD5) Previous issue date: 20199 h.application/pdfenengUrban and FischerMicrobiological Research, 2019, 223-225: 13-23Las obras depositadas en el Repositorio se rigen por la Ordenanza de los Derechos de la Propiedad Intelectual de la Universidad de la República.(Res. Nº 91 de C.D.C. de 8/III/1994 – D.O. 7/IV/1994) y por la Ordenanza del Repositorio Abierto de la Universidad de la República (Res. Nº 16 de C.D.C. de 07/10/2014)info:eu-repo/semantics/openAccessLicencia Creative Commons Atribución - No Comercial - Sin Derivadas (CC - By-NC-ND 4.0)AntarcticaCarbon cycleCellulaseFlavobacteriumSaccharificationCharacterization of the cellulase-secretome produced by the Antarctic bacterium Flavobacterium sp. 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- Universidad de la Repúblicafalse |
spellingShingle | Characterization of the cellulase-secretome produced by the Antarctic bacterium Flavobacterium sp. AUG42 Herrera, Lorena Antarctica Carbon cycle Cellulase Flavobacterium Saccharification |
status_str | publishedVersion |
title | Characterization of the cellulase-secretome produced by the Antarctic bacterium Flavobacterium sp. AUG42 |
title_full | Characterization of the cellulase-secretome produced by the Antarctic bacterium Flavobacterium sp. AUG42 |
title_fullStr | Characterization of the cellulase-secretome produced by the Antarctic bacterium Flavobacterium sp. AUG42 |
title_full_unstemmed | Characterization of the cellulase-secretome produced by the Antarctic bacterium Flavobacterium sp. AUG42 |
title_short | Characterization of the cellulase-secretome produced by the Antarctic bacterium Flavobacterium sp. AUG42 |
title_sort | Characterization of the cellulase-secretome produced by the Antarctic bacterium Flavobacterium sp. AUG42 |
topic | Antarctica Carbon cycle Cellulase Flavobacterium Saccharification |
url | https://hdl.handle.net/20.500.12008/27228 |