Characterization of the cellulase-secretome produced by the Antarctic bacterium Flavobacterium sp. AUG42

Herrera, Lorena - Braña, Victoria - Franco-Fraguas, Laura - Castro-Sowinski, Susana

Resumen:

Flavobacterium sp. AUG42 is a cellulase-producing bacterium isolated from the Antarctic oligochaete Grania sp. (Annelida). In this work, we report that AUG42 produces a glycoside hydrolase cocktail with CMCase, PASCase and cellobiase activities (optimum pHs and temperatures ranging from 5.5 to 6.5 and 40 to 50 °C, respectively). The time-course analyses of the bacterial growth and cellulase production showed that the cocktail has maximal activity at the stationary phase when growing at 16 °C with filter paper as a cellulosic carbon source, among the tested substrates. The analyses of the CAZome and the identification of secreted proteins by shotgun Mass Spectrometry analysis showed that five glycoside hydrolyses are present in the bacterial secretome, which probably cooperate in the degradation of the cellulosic substrates. Two of these glycoside hydrolyses may harbor putative carbohydrate binding modules, both with a cleft-like active site. The cellulolytic cocktail was assayed in saccharification experiments using carboxymethylcellulose as a substrate and results showed the release of glucose (a fermentable sugar) and other reducing-sugars, after 24 h incubation. The ecological relevance of producing cellulases in the Antarctic environment, as well as their potential use in the bio-refinery industry, are discussed.


Detalles Bibliográficos
2019
Antarctica
Carbon cycle
Cellulase
Flavobacterium
Saccharification
Inglés
Universidad de la República
COLIBRI
https://hdl.handle.net/20.500.12008/27228
Acceso abierto
Licencia Creative Commons Atribución - No Comercial - Sin Derivadas (CC - By-NC-ND 4.0)
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author Herrera, Lorena
author2 Braña, Victoria
Franco-Fraguas, Laura
Castro-Sowinski, Susana
author2_role author
author
author
author_facet Herrera, Lorena
Braña, Victoria
Franco-Fraguas, Laura
Castro-Sowinski, Susana
author_role author
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collection COLIBRI
dc.contributor.filiacion.none.fl_str_mv Herrera Lorena, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Biología.
Braña Victoria, IIBCE
Franco-Fraguas Laura, Universidad de la República (Uruguay). Facultad de Química.
Castro-Sowinski Susana, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Biología.
dc.creator.none.fl_str_mv Herrera, Lorena
Braña, Victoria
Franco-Fraguas, Laura
Castro-Sowinski, Susana
dc.date.accessioned.none.fl_str_mv 2021-04-23T14:25:28Z
dc.date.available.none.fl_str_mv 2021-04-23T14:25:28Z
dc.date.issued.none.fl_str_mv 2019
dc.description.abstract.none.fl_txt_mv Flavobacterium sp. AUG42 is a cellulase-producing bacterium isolated from the Antarctic oligochaete Grania sp. (Annelida). In this work, we report that AUG42 produces a glycoside hydrolase cocktail with CMCase, PASCase and cellobiase activities (optimum pHs and temperatures ranging from 5.5 to 6.5 and 40 to 50 °C, respectively). The time-course analyses of the bacterial growth and cellulase production showed that the cocktail has maximal activity at the stationary phase when growing at 16 °C with filter paper as a cellulosic carbon source, among the tested substrates. The analyses of the CAZome and the identification of secreted proteins by shotgun Mass Spectrometry analysis showed that five glycoside hydrolyses are present in the bacterial secretome, which probably cooperate in the degradation of the cellulosic substrates. Two of these glycoside hydrolyses may harbor putative carbohydrate binding modules, both with a cleft-like active site. The cellulolytic cocktail was assayed in saccharification experiments using carboxymethylcellulose as a substrate and results showed the release of glucose (a fermentable sugar) and other reducing-sugars, after 24 h incubation. The ecological relevance of producing cellulases in the Antarctic environment, as well as their potential use in the bio-refinery industry, are discussed.
dc.format.extent.es.fl_str_mv 9 h.
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dc.identifier.citation.es.fl_str_mv Herrera, L, Braña, V, Franco-Fraguas, L. y otros. "Characterization of the cellulase-secretome produced by the Antarctic bacterium Flavobacterium sp. AUG42". Microbiological Research. [en línea] 2019, 223-225:13-23. 9 h. DOI: 10.1016/j.micres.2019.03.009
dc.identifier.doi.none.fl_str_mv 10.1016/j.micres.2019.03.009
dc.identifier.issn.none.fl_str_mv 0944-5013
dc.identifier.uri.none.fl_str_mv https://hdl.handle.net/20.500.12008/27228
dc.language.iso.none.fl_str_mv en
eng
dc.publisher.es.fl_str_mv Urban and Fischer
dc.relation.ispartof.es.fl_str_mv Microbiological Research, 2019, 223-225: 13-23
dc.rights.license.none.fl_str_mv Licencia Creative Commons Atribución - No Comercial - Sin Derivadas (CC - By-NC-ND 4.0)
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
dc.source.none.fl_str_mv reponame:COLIBRI
instname:Universidad de la República
instacron:Universidad de la República
dc.subject.es.fl_str_mv Antarctica
Carbon cycle
Cellulase
Flavobacterium
Saccharification
dc.title.none.fl_str_mv Characterization of the cellulase-secretome produced by the Antarctic bacterium Flavobacterium sp. AUG42
dc.type.es.fl_str_mv Artículo
dc.type.none.fl_str_mv info:eu-repo/semantics/article
dc.type.version.none.fl_str_mv info:eu-repo/semantics/publishedVersion
description Flavobacterium sp. AUG42 is a cellulase-producing bacterium isolated from the Antarctic oligochaete Grania sp. (Annelida). In this work, we report that AUG42 produces a glycoside hydrolase cocktail with CMCase, PASCase and cellobiase activities (optimum pHs and temperatures ranging from 5.5 to 6.5 and 40 to 50 °C, respectively). The time-course analyses of the bacterial growth and cellulase production showed that the cocktail has maximal activity at the stationary phase when growing at 16 °C with filter paper as a cellulosic carbon source, among the tested substrates. The analyses of the CAZome and the identification of secreted proteins by shotgun Mass Spectrometry analysis showed that five glycoside hydrolyses are present in the bacterial secretome, which probably cooperate in the degradation of the cellulosic substrates. Two of these glycoside hydrolyses may harbor putative carbohydrate binding modules, both with a cleft-like active site. The cellulolytic cocktail was assayed in saccharification experiments using carboxymethylcellulose as a substrate and results showed the release of glucose (a fermentable sugar) and other reducing-sugars, after 24 h incubation. The ecological relevance of producing cellulases in the Antarctic environment, as well as their potential use in the bio-refinery industry, are discussed.
eu_rights_str_mv openAccess
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identifier_str_mv Herrera, L, Braña, V, Franco-Fraguas, L. y otros. "Characterization of the cellulase-secretome produced by the Antarctic bacterium Flavobacterium sp. AUG42". Microbiological Research. [en línea] 2019, 223-225:13-23. 9 h. DOI: 10.1016/j.micres.2019.03.009
0944-5013
10.1016/j.micres.2019.03.009
instacron_str Universidad de la República
institution Universidad de la República
instname_str Universidad de la República
language eng
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network_acronym_str COLIBRI
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publishDate 2019
reponame_str COLIBRI
repository.mail.fl_str_mv mabel.seroubian@seciu.edu.uy
repository.name.fl_str_mv COLIBRI - Universidad de la República
repository_id_str 4771
rights_invalid_str_mv Licencia Creative Commons Atribución - No Comercial - Sin Derivadas (CC - By-NC-ND 4.0)
spelling Herrera Lorena, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Biología.Braña Victoria, IIBCEFranco-Fraguas Laura, Universidad de la República (Uruguay). Facultad de Química.Castro-Sowinski Susana, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Biología.2021-04-23T14:25:28Z2021-04-23T14:25:28Z2019Herrera, L, Braña, V, Franco-Fraguas, L. y otros. "Characterization of the cellulase-secretome produced by the Antarctic bacterium Flavobacterium sp. AUG42". Microbiological Research. [en línea] 2019, 223-225:13-23. 9 h. DOI: 10.1016/j.micres.2019.03.0090944-5013https://hdl.handle.net/20.500.12008/2722810.1016/j.micres.2019.03.009Flavobacterium sp. AUG42 is a cellulase-producing bacterium isolated from the Antarctic oligochaete Grania sp. (Annelida). In this work, we report that AUG42 produces a glycoside hydrolase cocktail with CMCase, PASCase and cellobiase activities (optimum pHs and temperatures ranging from 5.5 to 6.5 and 40 to 50 °C, respectively). The time-course analyses of the bacterial growth and cellulase production showed that the cocktail has maximal activity at the stationary phase when growing at 16 °C with filter paper as a cellulosic carbon source, among the tested substrates. The analyses of the CAZome and the identification of secreted proteins by shotgun Mass Spectrometry analysis showed that five glycoside hydrolyses are present in the bacterial secretome, which probably cooperate in the degradation of the cellulosic substrates. Two of these glycoside hydrolyses may harbor putative carbohydrate binding modules, both with a cleft-like active site. The cellulolytic cocktail was assayed in saccharification experiments using carboxymethylcellulose as a substrate and results showed the release of glucose (a fermentable sugar) and other reducing-sugars, after 24 h incubation. The ecological relevance of producing cellulases in the Antarctic environment, as well as their potential use in the bio-refinery industry, are discussed.Submitted by Verdun Juan Pablo (jverdun@fcien.edu.uy) on 2021-04-22T16:37:23Z No. of bitstreams: 2 license_rdf: 23149 bytes, checksum: 1996b8461bc290aef6a27d78c67b6b52 (MD5) 10.1016j.micres.2019.03.009.pdf: 1576758 bytes, checksum: e38598624909d5af9382add3bfd6b776 (MD5)Approved for entry into archive by Faget Cecilia (lfaget@fcien.edu.uy) on 2021-04-23T14:11:56Z (GMT) No. of bitstreams: 2 license_rdf: 23149 bytes, checksum: 1996b8461bc290aef6a27d78c67b6b52 (MD5) 10.1016j.micres.2019.03.009.pdf: 1576758 bytes, checksum: e38598624909d5af9382add3bfd6b776 (MD5)Made available in DSpace by Luna Fabiana (fabiana.luna@seciu.edu.uy) on 2021-04-23T14:25:28Z (GMT). No. of bitstreams: 2 license_rdf: 23149 bytes, checksum: 1996b8461bc290aef6a27d78c67b6b52 (MD5) 10.1016j.micres.2019.03.009.pdf: 1576758 bytes, checksum: e38598624909d5af9382add3bfd6b776 (MD5) Previous issue date: 20199 h.application/pdfenengUrban and FischerMicrobiological Research, 2019, 223-225: 13-23Las obras depositadas en el Repositorio se rigen por la Ordenanza de los Derechos de la Propiedad Intelectual de la Universidad de la República.(Res. Nº 91 de C.D.C. de 8/III/1994 – D.O. 7/IV/1994) y por la Ordenanza del Repositorio Abierto de la Universidad de la República (Res. Nº 16 de C.D.C. de 07/10/2014)info:eu-repo/semantics/openAccessLicencia Creative Commons Atribución - No Comercial - Sin Derivadas (CC - By-NC-ND 4.0)AntarcticaCarbon cycleCellulaseFlavobacteriumSaccharificationCharacterization of the cellulase-secretome produced by the Antarctic bacterium Flavobacterium sp. 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- Universidad de la Repúblicafalse
spellingShingle Characterization of the cellulase-secretome produced by the Antarctic bacterium Flavobacterium sp. AUG42
Herrera, Lorena
Antarctica
Carbon cycle
Cellulase
Flavobacterium
Saccharification
status_str publishedVersion
title Characterization of the cellulase-secretome produced by the Antarctic bacterium Flavobacterium sp. AUG42
title_full Characterization of the cellulase-secretome produced by the Antarctic bacterium Flavobacterium sp. AUG42
title_fullStr Characterization of the cellulase-secretome produced by the Antarctic bacterium Flavobacterium sp. AUG42
title_full_unstemmed Characterization of the cellulase-secretome produced by the Antarctic bacterium Flavobacterium sp. AUG42
title_short Characterization of the cellulase-secretome produced by the Antarctic bacterium Flavobacterium sp. AUG42
title_sort Characterization of the cellulase-secretome produced by the Antarctic bacterium Flavobacterium sp. AUG42
topic Antarctica
Carbon cycle
Cellulase
Flavobacterium
Saccharification
url https://hdl.handle.net/20.500.12008/27228