Two mutations in the SBDS gene reveal a diagnosis of Shwachman-Diamond syndrome in a patient with atypical symptoms

Spangenberg, María Noel - Grille, Sofía - Simoes, Camila - Dell’Oca, Nicolás - Boada, Matilde - Guillermo, Cecilia - Raggio, Víctor - Spangenberg, Lucía

Resumen:

We present the case of a 53-yr-old woman with an inherited bone marrow failure coexisting with uncommon extrahematological symptoms, such as cirrhosis and skin abnormalities. Whole-exome sequencing revealed a diagnosis of Shwachman–Diamond syndrome (SDS) with an atypical presentation. Unexpected was the age of disease expression, normally around the pediatric age, with a predominantly median survival age of 36 yr. To our knowledge, she was the first adult patient with a molecular diagnosis of Shwachman–Diamond in Uruguay. The patient was referred to our service when she was 43-yr-old with a history of bone marrow failure with anemia and thrombocytopenia. All secondary causes of pancytopenia were excluded. Bone marrow aspirate and biopsy specimens were hypocellular for the patient’s age. Numerous dysplastic features were observed in the three lineages. She had a normal karyotype and normal chromosomal fragility. A diagnosis of lowrisk hypoplastic MDS was made. Dermatological examination revealed reticulate skin pigmentation with hypopigmented macules involving the face, neck, and extremities; nail dystrophy; premature graying; and thin hair. Extrahematological manifestations were present (e.g., learning difficulties, short stature). Last, she was diagnosed with cryptogenic liver cirrhosis CHILD C. This rules out all other possible causes of chronic liver disease. This clinical presentation initially oriented the diagnosis toward telomeropathy, so we did a telomeropathy NGS panel that came up negative. Finally, we did an exome sequencing that confirmed the diagnosis of SDS. Using whole-exome sequencing, we were able to find two compound heterozygous mutations in the SBDS gene that were responsible for the phenotype of a patient that was undiagnosed for 10 years. An earlier genetic diagnosis could have influenced our patient’s outcome.

Detalles Bibliográficos
2022
Bone marrow hypocellularity
Hematological neoplasm
Multiple lineage myelodysplasia
ENFERMEDADES DE LA MÉDULA ÓSEA
GENÉTICA
DIAGNÓSTICO
INSUFICIENCIA PANCREÁTICA EXOCRINA
MUJERES
MUTACIÓN
PROTEÍNAS
SÍNDROME DE SHWACHMAN-DIAMOND
Inglés
Universidad de la República
COLIBRI
https://hdl.handle.net/20.500.12008/54382
Acceso abierto
Licencia Creative Commons Atribución - No Comercial (CC - By-NC 4.0)
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author Spangenberg, María Noel
author2 Grille, Sofía
Simoes, Camila
Dell’Oca, Nicolás
Boada, Matilde
Guillermo, Cecilia
Raggio, Víctor
Spangenberg, Lucía
author2_role author
author
author
author
author
author
author
author_facet Spangenberg, María Noel
Grille, Sofía
Simoes, Camila
Dell’Oca, Nicolás
Boada, Matilde
Guillermo, Cecilia
Raggio, Víctor
Spangenberg, Lucía
author_role author
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collection COLIBRI
dc.contributor.filiacion.none.fl_str_mv Spangenberg María Noel, Universidad de la República (Uruguay). Facultad de Medicina. Departamento de Hematología
Grille Sofía, Universidad de la República (Uruguay). Facultad de Medicina. Departamento Básico de Medicina
Simoes Camila, Institut Pasteur de Montevideo (Uruguay). Unidad de Bioinformática
Dell’Oca Nicolás, Universidad de la República (Uruguay). Facultad de Medicina. Departamento de Genética
Boada Matilde, Universidad de la República (Uruguay). Facultad de Medicina. Departamento de Hematología
Guillermo Cecilia, Universidad de la República (Uruguay). Facultad de Medicina. Departamento de Hematología
Raggio Víctor, Universidad de la República (Uruguay). Facultad de Medicina. Departamento de Genética
Spangenberg Lucía, Institut Pasteur de Montevideo (Uruguay). Unidad de Bioinformática
dc.creator.none.fl_str_mv Spangenberg, María Noel
Grille, Sofía
Simoes, Camila
Dell’Oca, Nicolás
Boada, Matilde
Guillermo, Cecilia
Raggio, Víctor
Spangenberg, Lucía
dc.date.accessioned.none.fl_str_mv 2026-04-15T15:59:57Z
dc.date.available.none.fl_str_mv 2026-04-15T15:59:57Z
dc.date.issued.none.fl_str_mv 2022
dc.description.abstract.none.fl_txt_mv We present the case of a 53-yr-old woman with an inherited bone marrow failure coexisting with uncommon extrahematological symptoms, such as cirrhosis and skin abnormalities. Whole-exome sequencing revealed a diagnosis of Shwachman–Diamond syndrome (SDS) with an atypical presentation. Unexpected was the age of disease expression, normally around the pediatric age, with a predominantly median survival age of 36 yr. To our knowledge, she was the first adult patient with a molecular diagnosis of Shwachman–Diamond in Uruguay. The patient was referred to our service when she was 43-yr-old with a history of bone marrow failure with anemia and thrombocytopenia. All secondary causes of pancytopenia were excluded. Bone marrow aspirate and biopsy specimens were hypocellular for the patient’s age. Numerous dysplastic features were observed in the three lineages. She had a normal karyotype and normal chromosomal fragility. A diagnosis of lowrisk hypoplastic MDS was made. Dermatological examination revealed reticulate skin pigmentation with hypopigmented macules involving the face, neck, and extremities; nail dystrophy; premature graying; and thin hair. Extrahematological manifestations were present (e.g., learning difficulties, short stature). Last, she was diagnosed with cryptogenic liver cirrhosis CHILD C. This rules out all other possible causes of chronic liver disease. This clinical presentation initially oriented the diagnosis toward telomeropathy, so we did a telomeropathy NGS panel that came up negative. Finally, we did an exome sequencing that confirmed the diagnosis of SDS. Using whole-exome sequencing, we were able to find two compound heterozygous mutations in the SBDS gene that were responsible for the phenotype of a patient that was undiagnosed for 10 years. An earlier genetic diagnosis could have influenced our patient’s outcome.
dc.format.extent.es.fl_str_mv 9 p.
dc.format.mimetype.es.fl_str_mv application/pdf
dc.identifier.citation.es.fl_str_mv Spangenberg M, Grille S, Simoes C y otros. Two mutations in the SBDS gene reveal a diagnosis of Shwachman-Diamond syndrome in a patient with atypical symptoms. Cold Spring Harbor Molecular Case Studies [en línea]. 2022;8. 9 p.
dc.identifier.doi.none.fl_str_mv 10.1101/mcs.a006237
dc.identifier.eissn.none.fl_str_mv 2373-2873
dc.identifier.uri.none.fl_str_mv https://hdl.handle.net/20.500.12008/54382
dc.language.iso.none.fl_str_mv en
eng
dc.relation.none.fl_str_mv Cold Spring Harbor Molecular Case Studies. 2022;8
dc.rights.license.none.fl_str_mv Licencia Creative Commons Atribución - No Comercial (CC - By-NC 4.0)
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
dc.source.none.fl_str_mv reponame:COLIBRI
instname:Universidad de la República
instacron:Universidad de la República
dc.subject.es.fl_str_mv Bone marrow hypocellularity
Hematological neoplasm
Multiple lineage myelodysplasia
dc.subject.other.es.fl_str_mv ENFERMEDADES DE LA MÉDULA ÓSEA
GENÉTICA
DIAGNÓSTICO
INSUFICIENCIA PANCREÁTICA EXOCRINA
MUJERES
MUTACIÓN
PROTEÍNAS
SÍNDROME DE SHWACHMAN-DIAMOND
dc.title.none.fl_str_mv Two mutations in the SBDS gene reveal a diagnosis of Shwachman-Diamond syndrome in a patient with atypical symptoms
dc.type.es.fl_str_mv Artículo
dc.type.none.fl_str_mv info:eu-repo/semantics/article
dc.type.version.none.fl_str_mv info:eu-repo/semantics/publishedVersion
description We present the case of a 53-yr-old woman with an inherited bone marrow failure coexisting with uncommon extrahematological symptoms, such as cirrhosis and skin abnormalities. Whole-exome sequencing revealed a diagnosis of Shwachman–Diamond syndrome (SDS) with an atypical presentation. Unexpected was the age of disease expression, normally around the pediatric age, with a predominantly median survival age of 36 yr. To our knowledge, she was the first adult patient with a molecular diagnosis of Shwachman–Diamond in Uruguay. The patient was referred to our service when she was 43-yr-old with a history of bone marrow failure with anemia and thrombocytopenia. All secondary causes of pancytopenia were excluded. Bone marrow aspirate and biopsy specimens were hypocellular for the patient’s age. Numerous dysplastic features were observed in the three lineages. She had a normal karyotype and normal chromosomal fragility. A diagnosis of lowrisk hypoplastic MDS was made. Dermatological examination revealed reticulate skin pigmentation with hypopigmented macules involving the face, neck, and extremities; nail dystrophy; premature graying; and thin hair. Extrahematological manifestations were present (e.g., learning difficulties, short stature). Last, she was diagnosed with cryptogenic liver cirrhosis CHILD C. This rules out all other possible causes of chronic liver disease. This clinical presentation initially oriented the diagnosis toward telomeropathy, so we did a telomeropathy NGS panel that came up negative. Finally, we did an exome sequencing that confirmed the diagnosis of SDS. Using whole-exome sequencing, we were able to find two compound heterozygous mutations in the SBDS gene that were responsible for the phenotype of a patient that was undiagnosed for 10 years. An earlier genetic diagnosis could have influenced our patient’s outcome.
eu_rights_str_mv openAccess
format article
id COLIBRI_b763a3ef4c418a9203644c8867eefb6a
identifier_str_mv Spangenberg M, Grille S, Simoes C y otros. Two mutations in the SBDS gene reveal a diagnosis of Shwachman-Diamond syndrome in a patient with atypical symptoms. Cold Spring Harbor Molecular Case Studies [en línea]. 2022;8. 9 p.
10.1101/mcs.a006237
2373-2873
instacron_str Universidad de la República
institution Universidad de la República
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language eng
language_invalid_str_mv en
network_acronym_str COLIBRI
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publishDate 2022
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repository.mail.fl_str_mv karina.camps@seciu.edu.uy
repository.name.fl_str_mv COLIBRI - Universidad de la República
repository_id_str 4771
rights_invalid_str_mv Licencia Creative Commons Atribución - No Comercial (CC - By-NC 4.0)
spelling Spangenberg María Noel, Universidad de la República (Uruguay). Facultad de Medicina. Departamento de HematologíaGrille Sofía, Universidad de la República (Uruguay). Facultad de Medicina. Departamento Básico de MedicinaSimoes Camila, Institut Pasteur de Montevideo (Uruguay). Unidad de BioinformáticaDell’Oca Nicolás, Universidad de la República (Uruguay). Facultad de Medicina. Departamento de GenéticaBoada Matilde, Universidad de la República (Uruguay). Facultad de Medicina. Departamento de HematologíaGuillermo Cecilia, Universidad de la República (Uruguay). Facultad de Medicina. Departamento de HematologíaRaggio Víctor, Universidad de la República (Uruguay). Facultad de Medicina. Departamento de GenéticaSpangenberg Lucía, Institut Pasteur de Montevideo (Uruguay). Unidad de Bioinformática2026-04-15T15:59:57Z2026-04-15T15:59:57Z2022Spangenberg M, Grille S, Simoes C y otros. Two mutations in the SBDS gene reveal a diagnosis of Shwachman-Diamond syndrome in a patient with atypical symptoms. Cold Spring Harbor Molecular Case Studies [en línea]. 2022;8. 9 p.https://hdl.handle.net/20.500.12008/5438210.1101/mcs.a0062372373-2873We present the case of a 53-yr-old woman with an inherited bone marrow failure coexisting with uncommon extrahematological symptoms, such as cirrhosis and skin abnormalities. Whole-exome sequencing revealed a diagnosis of Shwachman–Diamond syndrome (SDS) with an atypical presentation. Unexpected was the age of disease expression, normally around the pediatric age, with a predominantly median survival age of 36 yr. To our knowledge, she was the first adult patient with a molecular diagnosis of Shwachman–Diamond in Uruguay. The patient was referred to our service when she was 43-yr-old with a history of bone marrow failure with anemia and thrombocytopenia. All secondary causes of pancytopenia were excluded. Bone marrow aspirate and biopsy specimens were hypocellular for the patient’s age. Numerous dysplastic features were observed in the three lineages. She had a normal karyotype and normal chromosomal fragility. A diagnosis of lowrisk hypoplastic MDS was made. Dermatological examination revealed reticulate skin pigmentation with hypopigmented macules involving the face, neck, and extremities; nail dystrophy; premature graying; and thin hair. Extrahematological manifestations were present (e.g., learning difficulties, short stature). Last, she was diagnosed with cryptogenic liver cirrhosis CHILD C. This rules out all other possible causes of chronic liver disease. This clinical presentation initially oriented the diagnosis toward telomeropathy, so we did a telomeropathy NGS panel that came up negative. Finally, we did an exome sequencing that confirmed the diagnosis of SDS. Using whole-exome sequencing, we were able to find two compound heterozygous mutations in the SBDS gene that were responsible for the phenotype of a patient that was undiagnosed for 10 years. An earlier genetic diagnosis could have influenced our patient’s outcome.Submitted by Almiñana María Cecilia (marialminana@gmail.com) on 2026-04-15T12:41:29Z No. of bitstreams: 2 license_rdf: 26648 bytes, checksum: e9507f17d292a045f834ee111e4d098b (MD5) Two mutations in the SBDS gene reveal a diagnosis of Shwachman Diamond.pdf: 1895805 bytes, checksum: 71e4012a01f5814c034708f4f3973d9a (MD5)Approved for entry into archive by Almiñana María Cecilia (marialminana@gmail.com) on 2026-04-15T14:55:42Z (GMT) No. of bitstreams: 2 license_rdf: 26648 bytes, checksum: e9507f17d292a045f834ee111e4d098b (MD5) Two mutations in the SBDS gene reveal a diagnosis of Shwachman Diamond.pdf: 1895805 bytes, checksum: 71e4012a01f5814c034708f4f3973d9a (MD5)Made available in DSpace by Luna Fabiana (fabiana.luna@seciu.edu.uy) on 2026-04-15T15:59:57Z (GMT). No. of bitstreams: 2 license_rdf: 26648 bytes, checksum: e9507f17d292a045f834ee111e4d098b (MD5) Two mutations in the SBDS gene reveal a diagnosis of Shwachman Diamond.pdf: 1895805 bytes, checksum: 71e4012a01f5814c034708f4f3973d9a (MD5) Previous issue date: 20229 p.application/pdfenengCold Spring Harbor Molecular Case Studies. 2022;8Las obras depositadas en el Repositorio se rigen por la Ordenanza de los Derechos de la Propiedad Intelectual de la Universidad de la República.(Res. Nº 91 de C.D.C. de 8/III/1994 – D.O. 7/IV/1994) y por la Ordenanza del Repositorio Abierto de la Universidad de la República (Res. Nº 16 de C.D.C. de 07/10/2014)info:eu-repo/semantics/openAccessLicencia Creative Commons Atribución - No Comercial (CC - By-NC 4.0)Bone marrow hypocellularityHematological neoplasmMultiple lineage myelodysplasiaENFERMEDADES DE LA MÉDULA ÓSEAGENÉTICADIAGNÓSTICOINSUFICIENCIA PANCREÁTICA EXOCRINAMUJERESMUTACIÓNPROTEÍNASSÍNDROME DE SHWACHMAN-DIAMONDTwo mutations in the SBDS gene reveal a diagnosis of Shwachman-Diamond syndrome in a patient with atypical symptomsArtículoinfo:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionreponame:COLIBRIinstname:Universidad de la Repúblicainstacron:Universidad de la RepúblicaSpangenberg, María NoelGrille, SofíaSimoes, CamilaDell’Oca, NicolásBoada, MatildeGuillermo, CeciliaRaggio, VíctorSpangenberg, LucíaLICENSElicense.txtlicense.txttext/plain; charset=utf-84267http://localhost:8080/xmlui/bitstream/20.500.12008/54382/5/license.txt6429389a7df7277b72b7924fdc7d47a9MD55CC-LICENSElicense_urllicense_urltext/plain; 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públicahttps://udelar.edu.uy/https://www.colibri.udelar.edu.uy/oai/requestkarina.camps@seciu.edu.uyUruguayopendoar:47712026-04-15T15:59:57COLIBRI - Universidad de la Repúblicafalse
spellingShingle Two mutations in the SBDS gene reveal a diagnosis of Shwachman-Diamond syndrome in a patient with atypical symptoms
Spangenberg, María Noel
Bone marrow hypocellularity
Hematological neoplasm
Multiple lineage myelodysplasia
ENFERMEDADES DE LA MÉDULA ÓSEA
GENÉTICA
DIAGNÓSTICO
INSUFICIENCIA PANCREÁTICA EXOCRINA
MUJERES
MUTACIÓN
PROTEÍNAS
SÍNDROME DE SHWACHMAN-DIAMOND
status_str publishedVersion
title Two mutations in the SBDS gene reveal a diagnosis of Shwachman-Diamond syndrome in a patient with atypical symptoms
title_full Two mutations in the SBDS gene reveal a diagnosis of Shwachman-Diamond syndrome in a patient with atypical symptoms
title_fullStr Two mutations in the SBDS gene reveal a diagnosis of Shwachman-Diamond syndrome in a patient with atypical symptoms
title_full_unstemmed Two mutations in the SBDS gene reveal a diagnosis of Shwachman-Diamond syndrome in a patient with atypical symptoms
title_short Two mutations in the SBDS gene reveal a diagnosis of Shwachman-Diamond syndrome in a patient with atypical symptoms
title_sort Two mutations in the SBDS gene reveal a diagnosis of Shwachman-Diamond syndrome in a patient with atypical symptoms
topic Bone marrow hypocellularity
Hematological neoplasm
Multiple lineage myelodysplasia
ENFERMEDADES DE LA MÉDULA ÓSEA
GENÉTICA
DIAGNÓSTICO
INSUFICIENCIA PANCREÁTICA EXOCRINA
MUJERES
MUTACIÓN
PROTEÍNAS
SÍNDROME DE SHWACHMAN-DIAMOND
url https://hdl.handle.net/20.500.12008/54382