Deciphering post-transcriptional regulation mechanism mediated by p53 during the unfolded protein response (UPR)
Resumen:
The tumor suppressor protein p53 is a central factor that contributes to cell homeostasis as it regulates expression of many genes associated with normal cellular processes such as cell cycle, proliferation, apoptosis, senescence, autophagy and metabolism, among others. Most of the known regulation exerted by p53 occurs at the transcription level, which is supported by its well characterized DNA-binding and trans-activation domains that are altered by many cancer-associated p53 mutations. In addition, p53 is involved in cellular responses to various types of stress, among which DNA damage, oncogene activation and ribosomal stress are the most studied. However, recent studies have proposed that p53 also plays a role in coordinating post-transcriptional regulatory mechanisms during unfolded protein response (UPR). The UPR is activated when misfolded or unfolded proteins accumulate in the lumen of the endoplasmic reticulum (ER), and although its main purpose is to restore the proteostasis of normal cells that produce large amounts of proteins, it has been found altered in pathologies such as cancer, diabetes, and neurodegenerative diseases. In order to elucidate the possible regulatory mechanisms mediated by p53, we have analyzed the transcriptome and proteome of p53-null human H1299 cells under ER stress conditions both in presence and absence of p53. The results show that p53 activity is required to elicit a fully operational UPR and that, unlike what occurs in other conditions, it promotes a marked inhibition of gene expression, both at the mRNA and protein levels. Moreover, many proteins down-regulated during the UPR in a p53-dependent manner show no difference in mRNA abundance suggesting that post-transcriptional mechanisms are particularly relevant during the UPR and are the current focus of our work.
2023 | |
ANII: FCE_3_2020_1_161877. | |
p53 UPR Transcriptoma Proteoma Regulación post-transcripcional |
|
Inglés | |
Universidad de la República | |
COLIBRI | |
https://hdl.handle.net/20.500.12008/41655 | |
Acceso abierto | |
Licencia Creative Commons Atribución - No Comercial - Compartir Igual (CC - By-NC-SA 4.0) |
_version_ | 1807522805361672192 |
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author | Larghero Valdivia, Irene |
author2 | Fernández Calero, Tamara Barbot, Catalina Portela, María Magdalena Costa, Fabrizzio Perelmuter, Karen Bollati-Fogolín, Mariela Durán, Rosario Marín Gutiérrez, Mónica Ehrlich, Ricardo Fåhraeus, Robin López Ferreira, Luis Ignacio |
author2_role | author author author author author author author author author author author |
author_facet | Larghero Valdivia, Irene Fernández Calero, Tamara Barbot, Catalina Portela, María Magdalena Costa, Fabrizzio Perelmuter, Karen Bollati-Fogolín, Mariela Durán, Rosario Marín Gutiérrez, Mónica Ehrlich, Ricardo Fåhraeus, Robin López Ferreira, Luis Ignacio |
author_role | author |
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collection | COLIBRI |
dc.contributor.filiacion.none.fl_str_mv | Larghero Valdivia Irene, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Química Biológica. Fernández Calero Tamara, Instituto Pasteur (Montevideo). Barbot Catalina, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Química Biológica. Portela María Magdalena, Instituto Pasteur (Montevideo). Costa Fabrizzio, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Química Biológica. Perelmuter Karen, Instituto Pasteur (Montevideo). Bollati-Fogolín Mariela, Instituto Pasteur (Montevideo). Durán Rosario, Instituto Pasteur (Montevideo). Marín Gutiérrez Mónica, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Química Biológica. Ehrlich Ricardo, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Química Biológica. Fåhraeus Robin López Ferreira Luis Ignacio, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Química Biológica. |
dc.creator.none.fl_str_mv | Larghero Valdivia, Irene Fernández Calero, Tamara Barbot, Catalina Portela, María Magdalena Costa, Fabrizzio Perelmuter, Karen Bollati-Fogolín, Mariela Durán, Rosario Marín Gutiérrez, Mónica Ehrlich, Ricardo Fåhraeus, Robin López Ferreira, Luis Ignacio |
dc.date.accessioned.none.fl_str_mv | 2023-12-04T15:40:18Z |
dc.date.available.none.fl_str_mv | 2023-12-04T15:40:18Z |
dc.date.issued.none.fl_str_mv | 2023 |
dc.description.abstract.none.fl_txt_mv | The tumor suppressor protein p53 is a central factor that contributes to cell homeostasis as it regulates expression of many genes associated with normal cellular processes such as cell cycle, proliferation, apoptosis, senescence, autophagy and metabolism, among others. Most of the known regulation exerted by p53 occurs at the transcription level, which is supported by its well characterized DNA-binding and trans-activation domains that are altered by many cancer-associated p53 mutations. In addition, p53 is involved in cellular responses to various types of stress, among which DNA damage, oncogene activation and ribosomal stress are the most studied. However, recent studies have proposed that p53 also plays a role in coordinating post-transcriptional regulatory mechanisms during unfolded protein response (UPR). The UPR is activated when misfolded or unfolded proteins accumulate in the lumen of the endoplasmic reticulum (ER), and although its main purpose is to restore the proteostasis of normal cells that produce large amounts of proteins, it has been found altered in pathologies such as cancer, diabetes, and neurodegenerative diseases. In order to elucidate the possible regulatory mechanisms mediated by p53, we have analyzed the transcriptome and proteome of p53-null human H1299 cells under ER stress conditions both in presence and absence of p53. The results show that p53 activity is required to elicit a fully operational UPR and that, unlike what occurs in other conditions, it promotes a marked inhibition of gene expression, both at the mRNA and protein levels. Moreover, many proteins down-regulated during the UPR in a p53-dependent manner show no difference in mRNA abundance suggesting that post-transcriptional mechanisms are particularly relevant during the UPR and are the current focus of our work. |
dc.description.sponsorship.none.fl_txt_mv | ANII: FCE_3_2020_1_161877. |
dc.format.extent.es.fl_str_mv | 1 h |
dc.format.mimetype.es.fl_str_mv | application/pdf |
dc.identifier.citation.es.fl_str_mv | Larghero Valdivia, I, Fernández Calero, T, Barbot, C, [ y otros autores]. Deciphering post-transcriptional regulation mechanism mediated by p53 during the unfolded protein response (UPR) [en línea] EN: Congreso: 3rd. Molecular Biosystems Conference on Eukaryotic Gene Regulation & Functional Genomics, Sep 25-29, 2023. Puerto Varas : Sociedad de Bioquímica y Biología Molecular de Chile, 2023. 1 h |
dc.identifier.uri.none.fl_str_mv | https://hdl.handle.net/20.500.12008/41655 |
dc.language.iso.none.fl_str_mv | en eng |
dc.publisher.es.fl_str_mv | Sociedad de Bioquímica y Biología Molecular de Chile |
dc.relation.ispartof.es.fl_str_mv | Congreso: 3rd. Molecular Biosystems Conference on Eukaryotic Gene Regulation & Functional Genomics, Sep 25-29, 2023. Puerto Varas, Chile. |
dc.rights.license.none.fl_str_mv | Licencia Creative Commons Atribución - No Comercial - Compartir Igual (CC - By-NC-SA 4.0) |
dc.rights.none.fl_str_mv | info:eu-repo/semantics/openAccess |
dc.source.none.fl_str_mv | reponame:COLIBRI instname:Universidad de la República instacron:Universidad de la República |
dc.subject.es.fl_str_mv | p53 UPR Transcriptoma Proteoma Regulación post-transcripcional |
dc.title.none.fl_str_mv | Deciphering post-transcriptional regulation mechanism mediated by p53 during the unfolded protein response (UPR) |
dc.type.es.fl_str_mv | Ponencia |
dc.type.none.fl_str_mv | info:eu-repo/semantics/conferenceObject |
dc.type.version.none.fl_str_mv | info:eu-repo/semantics/publishedVersion |
description | The tumor suppressor protein p53 is a central factor that contributes to cell homeostasis as it regulates expression of many genes associated with normal cellular processes such as cell cycle, proliferation, apoptosis, senescence, autophagy and metabolism, among others. Most of the known regulation exerted by p53 occurs at the transcription level, which is supported by its well characterized DNA-binding and trans-activation domains that are altered by many cancer-associated p53 mutations. In addition, p53 is involved in cellular responses to various types of stress, among which DNA damage, oncogene activation and ribosomal stress are the most studied. However, recent studies have proposed that p53 also plays a role in coordinating post-transcriptional regulatory mechanisms during unfolded protein response (UPR). The UPR is activated when misfolded or unfolded proteins accumulate in the lumen of the endoplasmic reticulum (ER), and although its main purpose is to restore the proteostasis of normal cells that produce large amounts of proteins, it has been found altered in pathologies such as cancer, diabetes, and neurodegenerative diseases. In order to elucidate the possible regulatory mechanisms mediated by p53, we have analyzed the transcriptome and proteome of p53-null human H1299 cells under ER stress conditions both in presence and absence of p53. The results show that p53 activity is required to elicit a fully operational UPR and that, unlike what occurs in other conditions, it promotes a marked inhibition of gene expression, both at the mRNA and protein levels. Moreover, many proteins down-regulated during the UPR in a p53-dependent manner show no difference in mRNA abundance suggesting that post-transcriptional mechanisms are particularly relevant during the UPR and are the current focus of our work. |
eu_rights_str_mv | openAccess |
format | conferenceObject |
id | COLIBRI_af94205283afd79079d4db3cbbe47447 |
identifier_str_mv | Larghero Valdivia, I, Fernández Calero, T, Barbot, C, [ y otros autores]. Deciphering post-transcriptional regulation mechanism mediated by p53 during the unfolded protein response (UPR) [en línea] EN: Congreso: 3rd. Molecular Biosystems Conference on Eukaryotic Gene Regulation & Functional Genomics, Sep 25-29, 2023. Puerto Varas : Sociedad de Bioquímica y Biología Molecular de Chile, 2023. 1 h |
instacron_str | Universidad de la República |
institution | Universidad de la República |
instname_str | Universidad de la República |
language | eng |
language_invalid_str_mv | en |
network_acronym_str | COLIBRI |
network_name_str | COLIBRI |
oai_identifier_str | oai:colibri.udelar.edu.uy:20.500.12008/41655 |
publishDate | 2023 |
reponame_str | COLIBRI |
repository.mail.fl_str_mv | mabel.seroubian@seciu.edu.uy |
repository.name.fl_str_mv | COLIBRI - Universidad de la República |
repository_id_str | 4771 |
rights_invalid_str_mv | Licencia Creative Commons Atribución - No Comercial - Compartir Igual (CC - By-NC-SA 4.0) |
spelling | Larghero Valdivia Irene, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Química Biológica.Fernández Calero Tamara, Instituto Pasteur (Montevideo).Barbot Catalina, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Química Biológica.Portela María Magdalena, Instituto Pasteur (Montevideo).Costa Fabrizzio, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Química Biológica.Perelmuter Karen, Instituto Pasteur (Montevideo).Bollati-Fogolín Mariela, Instituto Pasteur (Montevideo).Durán Rosario, Instituto Pasteur (Montevideo).Marín Gutiérrez Mónica, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Química Biológica.Ehrlich Ricardo, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Química Biológica.Fåhraeus RobinLópez Ferreira Luis Ignacio, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Química Biológica.2023-12-04T15:40:18Z2023-12-04T15:40:18Z2023Larghero Valdivia, I, Fernández Calero, T, Barbot, C, [ y otros autores]. Deciphering post-transcriptional regulation mechanism mediated by p53 during the unfolded protein response (UPR) [en línea] EN: Congreso: 3rd. Molecular Biosystems Conference on Eukaryotic Gene Regulation & Functional Genomics, Sep 25-29, 2023. Puerto Varas : Sociedad de Bioquímica y Biología Molecular de Chile, 2023. 1 hhttps://hdl.handle.net/20.500.12008/41655The tumor suppressor protein p53 is a central factor that contributes to cell homeostasis as it regulates expression of many genes associated with normal cellular processes such as cell cycle, proliferation, apoptosis, senescence, autophagy and metabolism, among others. Most of the known regulation exerted by p53 occurs at the transcription level, which is supported by its well characterized DNA-binding and trans-activation domains that are altered by many cancer-associated p53 mutations. In addition, p53 is involved in cellular responses to various types of stress, among which DNA damage, oncogene activation and ribosomal stress are the most studied. However, recent studies have proposed that p53 also plays a role in coordinating post-transcriptional regulatory mechanisms during unfolded protein response (UPR). The UPR is activated when misfolded or unfolded proteins accumulate in the lumen of the endoplasmic reticulum (ER), and although its main purpose is to restore the proteostasis of normal cells that produce large amounts of proteins, it has been found altered in pathologies such as cancer, diabetes, and neurodegenerative diseases. In order to elucidate the possible regulatory mechanisms mediated by p53, we have analyzed the transcriptome and proteome of p53-null human H1299 cells under ER stress conditions both in presence and absence of p53. The results show that p53 activity is required to elicit a fully operational UPR and that, unlike what occurs in other conditions, it promotes a marked inhibition of gene expression, both at the mRNA and protein levels. Moreover, many proteins down-regulated during the UPR in a p53-dependent manner show no difference in mRNA abundance suggesting that post-transcriptional mechanisms are particularly relevant during the UPR and are the current focus of our work.Submitted by Faget Cecilia (lfaget@fcien.edu.uy) on 2023-12-04T15:14:24Z No. of bitstreams: 2 license_rdf: 26308 bytes, checksum: 27d85011139cdc22b845da52c980f01f (MD5) 4_Larghero_mBio_23.pdf: 54168 bytes, checksum: 7d5f63a6bd400885b2ccecd20af65bd3 (MD5)Approved for entry into archive by Faget Cecilia (lfaget@fcien.edu.uy) on 2023-12-04T15:14:45Z (GMT) No. of bitstreams: 2 license_rdf: 26308 bytes, checksum: 27d85011139cdc22b845da52c980f01f (MD5) 4_Larghero_mBio_23.pdf: 54168 bytes, checksum: 7d5f63a6bd400885b2ccecd20af65bd3 (MD5)Made available in DSpace by Luna Fabiana (fabiana.luna@seciu.edu.uy) on 2023-12-04T15:40:18Z (GMT). No. of bitstreams: 2 license_rdf: 26308 bytes, checksum: 27d85011139cdc22b845da52c980f01f (MD5) 4_Larghero_mBio_23.pdf: 54168 bytes, checksum: 7d5f63a6bd400885b2ccecd20af65bd3 (MD5) Previous issue date: 2023ANII: FCE_3_2020_1_161877.1 happlication/pdfenengSociedad de Bioquímica y Biología Molecular de ChileCongreso: 3rd. Molecular Biosystems Conference on Eukaryotic Gene Regulation & Functional Genomics, Sep 25-29, 2023. Puerto Varas, Chile.Las obras depositadas en el Repositorio se rigen por la Ordenanza de los Derechos de la Propiedad Intelectual de la Universidad de la República.(Res. Nº 91 de C.D.C. de 8/III/1994 – D.O. 7/IV/1994) y por la Ordenanza del Repositorio Abierto de la Universidad de la República (Res. Nº 16 de C.D.C. de 07/10/2014)info:eu-repo/semantics/openAccessLicencia Creative Commons Atribución - No Comercial - Compartir Igual (CC - By-NC-SA 4.0)p53UPRTranscriptomaProteomaRegulación post-transcripcionalDeciphering post-transcriptional regulation mechanism mediated by p53 during the unfolded protein response (UPR)Ponenciainfo:eu-repo/semantics/conferenceObjectinfo:eu-repo/semantics/publishedVersionreponame:COLIBRIinstname:Universidad de la Repúblicainstacron:Universidad de la RepúblicaLarghero Valdivia, IreneFernández Calero, TamaraBarbot, CatalinaPortela, María MagdalenaCosta, FabrizzioPerelmuter, KarenBollati-Fogolín, MarielaDurán, RosarioMarín Gutiérrez, MónicaEhrlich, RicardoFåhraeus, RobinLópez Ferreira, Luis IgnacioLICENSElicense.txtlicense.txttext/plain; charset=utf-84267http://localhost:8080/xmlui/bitstream/20.500.12008/41655/5/license.txt6429389a7df7277b72b7924fdc7d47a9MD55CC-LICENSElicense_urllicense_urltext/plain; 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- Universidad de la Repúblicafalse |
spellingShingle | Deciphering post-transcriptional regulation mechanism mediated by p53 during the unfolded protein response (UPR) Larghero Valdivia, Irene p53 UPR Transcriptoma Proteoma Regulación post-transcripcional |
status_str | publishedVersion |
title | Deciphering post-transcriptional regulation mechanism mediated by p53 during the unfolded protein response (UPR) |
title_full | Deciphering post-transcriptional regulation mechanism mediated by p53 during the unfolded protein response (UPR) |
title_fullStr | Deciphering post-transcriptional regulation mechanism mediated by p53 during the unfolded protein response (UPR) |
title_full_unstemmed | Deciphering post-transcriptional regulation mechanism mediated by p53 during the unfolded protein response (UPR) |
title_short | Deciphering post-transcriptional regulation mechanism mediated by p53 during the unfolded protein response (UPR) |
title_sort | Deciphering post-transcriptional regulation mechanism mediated by p53 during the unfolded protein response (UPR) |
topic | p53 UPR Transcriptoma Proteoma Regulación post-transcripcional |
url | https://hdl.handle.net/20.500.12008/41655 |