Abundance and phylogenetic distribution of eight key enzymes of the phosphorus biogeochemical cycle in grassland soils

Garaycochea Solsona, Silvia - Altier, Nora Adriana - Leoni, Carolina - Neal, Andrew L. - Romero Brunetto, Héctor Gabriel

Resumen:

Grassland biomes provide valuable ecosystem services, including nutrient cycling. Organic phosphorus (Po) represents more than half of the total P in soils. Soil microorganisms release organic P through enzymatic processes, with alkaline phosphatases, acid phosphatases and phytases being the key P enzymes involved in the cycling of organic P. This study analysed 74 soil metagenomes from 17 different grassland biomes worldwide to evaluate the distribution and abundance of eight key P enzymes (PhoD, PhoX, PhoA, Nsap-A, Nsap-B, Nsap-C, BPP and CPhy) and their relationship with environmental factors. Our analyses showed that alkaline phosphatase phoD was the dataset’s most abundant P-enzyme encoding genes, with a wide phylogenetic distribution. Followed by the acid phosphatases Nsap-A and Nsap-C showed similar abundance but a different distribution in their respective phylogenetic trees. Multivariate analyses revealed that pH, Tmax, SOC and soil moisture were associated with the abundance and diversity of all genes studied. PhoD and phoX genes strongly correlated with SOC and clay, and the phoX gene was more common in soils with low to medium SOC and neutral pH. In particular, P-enzyme genes tended to respond in a positively correlated manner among them, suggesting a complex relationship of abundance and diversity among them.


Detalles Bibliográficos
2023
ANII: POS_NAC_2015_1_110075
Inglés
Universidad de la República
COLIBRI
https://hdl.handle.net/20.500.12008/43181
Acceso abierto
Licencia Creative Commons Atribución (CC - By 4.0)
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author Garaycochea Solsona, Silvia
author2 Altier, Nora Adriana
Leoni, Carolina
Neal, Andrew L.
Romero Brunetto, Héctor Gabriel
author2_role author
author
author
author
author_facet Garaycochea Solsona, Silvia
Altier, Nora Adriana
Leoni, Carolina
Neal, Andrew L.
Romero Brunetto, Héctor Gabriel
author_role author
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collection COLIBRI
dc.contributor.filiacion.none.fl_str_mv Garaycochea Solsona Silvia, INIA
Altier Nora Adriana, INIA
Leoni Carolina, INIA
Neal Andrew L.
Romero Brunetto Héctor Gabriel, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Biología.
dc.creator.none.fl_str_mv Garaycochea Solsona, Silvia
Altier, Nora Adriana
Leoni, Carolina
Neal, Andrew L.
Romero Brunetto, Héctor Gabriel
dc.date.accessioned.none.fl_str_mv 2024-03-19T12:46:47Z
dc.date.available.none.fl_str_mv 2024-03-19T12:46:47Z
dc.date.issued.none.fl_str_mv 2023
dc.description.abstract.none.fl_txt_mv Grassland biomes provide valuable ecosystem services, including nutrient cycling. Organic phosphorus (Po) represents more than half of the total P in soils. Soil microorganisms release organic P through enzymatic processes, with alkaline phosphatases, acid phosphatases and phytases being the key P enzymes involved in the cycling of organic P. This study analysed 74 soil metagenomes from 17 different grassland biomes worldwide to evaluate the distribution and abundance of eight key P enzymes (PhoD, PhoX, PhoA, Nsap-A, Nsap-B, Nsap-C, BPP and CPhy) and their relationship with environmental factors. Our analyses showed that alkaline phosphatase phoD was the dataset’s most abundant P-enzyme encoding genes, with a wide phylogenetic distribution. Followed by the acid phosphatases Nsap-A and Nsap-C showed similar abundance but a different distribution in their respective phylogenetic trees. Multivariate analyses revealed that pH, Tmax, SOC and soil moisture were associated with the abundance and diversity of all genes studied. PhoD and phoX genes strongly correlated with SOC and clay, and the phoX gene was more common in soils with low to medium SOC and neutral pH. In particular, P-enzyme genes tended to respond in a positively correlated manner among them, suggesting a complex relationship of abundance and diversity among them.
dc.description.sponsorship.none.fl_txt_mv ANII: POS_NAC_2015_1_110075
dc.format.extent.es.fl_str_mv 18 h.
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dc.identifier.citation.es.fl_str_mv Garaycochea Solsona, S, Altier, N, Leoni, C [y otros autores]. "Abundance and phylogenetic distribution of eight key enzymes of the phosphorus biogeochemical cycle in grassland soils". Environmental Microbiology Reports. [en línea] 2023, 15(5): 352–369. 18 h. DOI: 10.1111/1758-2229.13159.
dc.identifier.doi.none.fl_str_mv 10.1111/1758-2229.13159
dc.identifier.issn.none.fl_str_mv 1758-2229
dc.identifier.uri.none.fl_str_mv https://hdl.handle.net/20.500.12008/43181
dc.language.iso.none.fl_str_mv en
eng
dc.publisher.es.fl_str_mv Wiley
dc.relation.ispartof.es.fl_str_mv Environmental Microbiology Reports, 2023, 15(5): 352–369.
dc.rights.license.none.fl_str_mv Licencia Creative Commons Atribución (CC - By 4.0)
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
dc.source.none.fl_str_mv reponame:COLIBRI
instname:Universidad de la República
instacron:Universidad de la República
dc.title.none.fl_str_mv Abundance and phylogenetic distribution of eight key enzymes of the phosphorus biogeochemical cycle in grassland soils
dc.type.es.fl_str_mv Artículo
dc.type.none.fl_str_mv info:eu-repo/semantics/article
dc.type.version.none.fl_str_mv info:eu-repo/semantics/publishedVersion
description Grassland biomes provide valuable ecosystem services, including nutrient cycling. Organic phosphorus (Po) represents more than half of the total P in soils. Soil microorganisms release organic P through enzymatic processes, with alkaline phosphatases, acid phosphatases and phytases being the key P enzymes involved in the cycling of organic P. This study analysed 74 soil metagenomes from 17 different grassland biomes worldwide to evaluate the distribution and abundance of eight key P enzymes (PhoD, PhoX, PhoA, Nsap-A, Nsap-B, Nsap-C, BPP and CPhy) and their relationship with environmental factors. Our analyses showed that alkaline phosphatase phoD was the dataset’s most abundant P-enzyme encoding genes, with a wide phylogenetic distribution. Followed by the acid phosphatases Nsap-A and Nsap-C showed similar abundance but a different distribution in their respective phylogenetic trees. Multivariate analyses revealed that pH, Tmax, SOC and soil moisture were associated with the abundance and diversity of all genes studied. PhoD and phoX genes strongly correlated with SOC and clay, and the phoX gene was more common in soils with low to medium SOC and neutral pH. In particular, P-enzyme genes tended to respond in a positively correlated manner among them, suggesting a complex relationship of abundance and diversity among them.
eu_rights_str_mv openAccess
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identifier_str_mv Garaycochea Solsona, S, Altier, N, Leoni, C [y otros autores]. "Abundance and phylogenetic distribution of eight key enzymes of the phosphorus biogeochemical cycle in grassland soils". Environmental Microbiology Reports. [en línea] 2023, 15(5): 352–369. 18 h. DOI: 10.1111/1758-2229.13159.
1758-2229
10.1111/1758-2229.13159
instacron_str Universidad de la República
institution Universidad de la República
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publishDate 2023
reponame_str COLIBRI
repository.mail.fl_str_mv mabel.seroubian@seciu.edu.uy
repository.name.fl_str_mv COLIBRI - Universidad de la República
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rights_invalid_str_mv Licencia Creative Commons Atribución (CC - By 4.0)
spelling Garaycochea Solsona Silvia, INIAAltier Nora Adriana, INIALeoni Carolina, INIANeal Andrew L.Romero Brunetto Héctor Gabriel, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Biología.2024-03-19T12:46:47Z2024-03-19T12:46:47Z2023Garaycochea Solsona, S, Altier, N, Leoni, C [y otros autores]. "Abundance and phylogenetic distribution of eight key enzymes of the phosphorus biogeochemical cycle in grassland soils". Environmental Microbiology Reports. [en línea] 2023, 15(5): 352–369. 18 h. DOI: 10.1111/1758-2229.13159.1758-2229https://hdl.handle.net/20.500.12008/4318110.1111/1758-2229.13159Grassland biomes provide valuable ecosystem services, including nutrient cycling. Organic phosphorus (Po) represents more than half of the total P in soils. Soil microorganisms release organic P through enzymatic processes, with alkaline phosphatases, acid phosphatases and phytases being the key P enzymes involved in the cycling of organic P. This study analysed 74 soil metagenomes from 17 different grassland biomes worldwide to evaluate the distribution and abundance of eight key P enzymes (PhoD, PhoX, PhoA, Nsap-A, Nsap-B, Nsap-C, BPP and CPhy) and their relationship with environmental factors. Our analyses showed that alkaline phosphatase phoD was the dataset’s most abundant P-enzyme encoding genes, with a wide phylogenetic distribution. Followed by the acid phosphatases Nsap-A and Nsap-C showed similar abundance but a different distribution in their respective phylogenetic trees. Multivariate analyses revealed that pH, Tmax, SOC and soil moisture were associated with the abundance and diversity of all genes studied. PhoD and phoX genes strongly correlated with SOC and clay, and the phoX gene was more common in soils with low to medium SOC and neutral pH. In particular, P-enzyme genes tended to respond in a positively correlated manner among them, suggesting a complex relationship of abundance and diversity among them.Submitted by Pintos Natalia (nataliapintosmvd@gmail.com) on 2024-03-18T14:30:52Z No. of bitstreams: 2 license_rdf: 24251 bytes, checksum: 71ed42ef0a0b648670f707320be37b90 (MD5) 10.1111.1758-2229.13159.pdf: 5658894 bytes, checksum: 7fe20485b29732b48236e71fd502b533 (MD5)Approved for entry into archive by Faget Cecilia (lfaget@fcien.edu.uy) on 2024-03-19T12:24:11Z (GMT) No. of bitstreams: 2 license_rdf: 24251 bytes, checksum: 71ed42ef0a0b648670f707320be37b90 (MD5) 10.1111.1758-2229.13159.pdf: 5658894 bytes, checksum: 7fe20485b29732b48236e71fd502b533 (MD5)Made available in DSpace by Luna Fabiana (fabiana.luna@seciu.edu.uy) on 2024-03-19T12:46:47Z (GMT). No. of bitstreams: 2 license_rdf: 24251 bytes, checksum: 71ed42ef0a0b648670f707320be37b90 (MD5) 10.1111.1758-2229.13159.pdf: 5658894 bytes, checksum: 7fe20485b29732b48236e71fd502b533 (MD5) Previous issue date: 2023ANII: POS_NAC_2015_1_11007518 h.application/pdfenengWileyEnvironmental Microbiology Reports, 2023, 15(5): 352–369.Las obras depositadas en el Repositorio se rigen por la Ordenanza de los Derechos de la Propiedad Intelectual de la Universidad de la República.(Res. Nº 91 de C.D.C. de 8/III/1994 – D.O. 7/IV/1994) y por la Ordenanza del Repositorio Abierto de la Universidad de la República (Res. Nº 16 de C.D.C. de 07/10/2014)info:eu-repo/semantics/openAccessLicencia Creative Commons Atribución (CC - By 4.0)Abundance and phylogenetic distribution of eight key enzymes of the phosphorus biogeochemical cycle in grassland soilsArtículoinfo:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionreponame:COLIBRIinstname:Universidad de la Repúblicainstacron:Universidad de la RepúblicaGaraycochea Solsona, SilviaAltier, Nora AdrianaLeoni, CarolinaNeal, Andrew L.Romero Brunetto, Héctor GabrielLICENSElicense.txtlicense.txttext/plain; charset=utf-84267http://localhost:8080/xmlui/bitstream/20.500.12008/43181/5/license.txt6429389a7df7277b72b7924fdc7d47a9MD55CC-LICENSElicense_urllicense_urltext/plain; charset=utf-844http://localhost:8080/xmlui/bitstream/20.500.12008/43181/2/license_urla0ebbeafb9d2ec7cbb19d7137ebc392cMD52license_textlicense_texttext/html; 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- Universidad de la Repúblicafalse
spellingShingle Abundance and phylogenetic distribution of eight key enzymes of the phosphorus biogeochemical cycle in grassland soils
Garaycochea Solsona, Silvia
status_str publishedVersion
title Abundance and phylogenetic distribution of eight key enzymes of the phosphorus biogeochemical cycle in grassland soils
title_full Abundance and phylogenetic distribution of eight key enzymes of the phosphorus biogeochemical cycle in grassland soils
title_fullStr Abundance and phylogenetic distribution of eight key enzymes of the phosphorus biogeochemical cycle in grassland soils
title_full_unstemmed Abundance and phylogenetic distribution of eight key enzymes of the phosphorus biogeochemical cycle in grassland soils
title_short Abundance and phylogenetic distribution of eight key enzymes of the phosphorus biogeochemical cycle in grassland soils
title_sort Abundance and phylogenetic distribution of eight key enzymes of the phosphorus biogeochemical cycle in grassland soils
url https://hdl.handle.net/20.500.12008/43181