Abundance and phylogenetic distribution of eight key enzymes of the phosphorus biogeochemical cycle in grassland soils
Resumen:
Grassland biomes provide valuable ecosystem services, including nutrient cycling. Organic phosphorus (Po) represents more than half of the total P in soils. Soil microorganisms release organic P through enzymatic processes, with alkaline phosphatases, acid phosphatases and phytases being the key P enzymes involved in the cycling of organic P. This study analysed 74 soil metagenomes from 17 different grassland biomes worldwide to evaluate the distribution and abundance of eight key P enzymes (PhoD, PhoX, PhoA, Nsap-A, Nsap-B, Nsap-C, BPP and CPhy) and their relationship with environmental factors. Our analyses showed that alkaline phosphatase phoD was the dataset’s most abundant P-enzyme encoding genes, with a wide phylogenetic distribution. Followed by the acid phosphatases Nsap-A and Nsap-C showed similar abundance but a different distribution in their respective phylogenetic trees. Multivariate analyses revealed that pH, Tmax, SOC and soil moisture were associated with the abundance and diversity of all genes studied. PhoD and phoX genes strongly correlated with SOC and clay, and the phoX gene was more common in soils with low to medium SOC and neutral pH. In particular, P-enzyme genes tended to respond in a positively correlated manner among them, suggesting a complex relationship of abundance and diversity among them.
2023 | |
ANII: POS_NAC_2015_1_110075 | |
Inglés | |
Universidad de la República | |
COLIBRI | |
https://hdl.handle.net/20.500.12008/43181 | |
Acceso abierto | |
Licencia Creative Commons Atribución (CC - By 4.0) |
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---|---|
author | Garaycochea Solsona, Silvia |
author2 | Altier, Nora Adriana Leoni, Carolina Neal, Andrew L. Romero Brunetto, Héctor Gabriel |
author2_role | author author author author |
author_facet | Garaycochea Solsona, Silvia Altier, Nora Adriana Leoni, Carolina Neal, Andrew L. Romero Brunetto, Héctor Gabriel |
author_role | author |
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collection | COLIBRI |
dc.contributor.filiacion.none.fl_str_mv | Garaycochea Solsona Silvia, INIA Altier Nora Adriana, INIA Leoni Carolina, INIA Neal Andrew L. Romero Brunetto Héctor Gabriel, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Biología. |
dc.creator.none.fl_str_mv | Garaycochea Solsona, Silvia Altier, Nora Adriana Leoni, Carolina Neal, Andrew L. Romero Brunetto, Héctor Gabriel |
dc.date.accessioned.none.fl_str_mv | 2024-03-19T12:46:47Z |
dc.date.available.none.fl_str_mv | 2024-03-19T12:46:47Z |
dc.date.issued.none.fl_str_mv | 2023 |
dc.description.abstract.none.fl_txt_mv | Grassland biomes provide valuable ecosystem services, including nutrient cycling. Organic phosphorus (Po) represents more than half of the total P in soils. Soil microorganisms release organic P through enzymatic processes, with alkaline phosphatases, acid phosphatases and phytases being the key P enzymes involved in the cycling of organic P. This study analysed 74 soil metagenomes from 17 different grassland biomes worldwide to evaluate the distribution and abundance of eight key P enzymes (PhoD, PhoX, PhoA, Nsap-A, Nsap-B, Nsap-C, BPP and CPhy) and their relationship with environmental factors. Our analyses showed that alkaline phosphatase phoD was the dataset’s most abundant P-enzyme encoding genes, with a wide phylogenetic distribution. Followed by the acid phosphatases Nsap-A and Nsap-C showed similar abundance but a different distribution in their respective phylogenetic trees. Multivariate analyses revealed that pH, Tmax, SOC and soil moisture were associated with the abundance and diversity of all genes studied. PhoD and phoX genes strongly correlated with SOC and clay, and the phoX gene was more common in soils with low to medium SOC and neutral pH. In particular, P-enzyme genes tended to respond in a positively correlated manner among them, suggesting a complex relationship of abundance and diversity among them. |
dc.description.sponsorship.none.fl_txt_mv | ANII: POS_NAC_2015_1_110075 |
dc.format.extent.es.fl_str_mv | 18 h. |
dc.format.mimetype.es.fl_str_mv | application/pdf |
dc.identifier.citation.es.fl_str_mv | Garaycochea Solsona, S, Altier, N, Leoni, C [y otros autores]. "Abundance and phylogenetic distribution of eight key enzymes of the phosphorus biogeochemical cycle in grassland soils". Environmental Microbiology Reports. [en línea] 2023, 15(5): 352–369. 18 h. DOI: 10.1111/1758-2229.13159. |
dc.identifier.doi.none.fl_str_mv | 10.1111/1758-2229.13159 |
dc.identifier.issn.none.fl_str_mv | 1758-2229 |
dc.identifier.uri.none.fl_str_mv | https://hdl.handle.net/20.500.12008/43181 |
dc.language.iso.none.fl_str_mv | en eng |
dc.publisher.es.fl_str_mv | Wiley |
dc.relation.ispartof.es.fl_str_mv | Environmental Microbiology Reports, 2023, 15(5): 352–369. |
dc.rights.license.none.fl_str_mv | Licencia Creative Commons Atribución (CC - By 4.0) |
dc.rights.none.fl_str_mv | info:eu-repo/semantics/openAccess |
dc.source.none.fl_str_mv | reponame:COLIBRI instname:Universidad de la República instacron:Universidad de la República |
dc.title.none.fl_str_mv | Abundance and phylogenetic distribution of eight key enzymes of the phosphorus biogeochemical cycle in grassland soils |
dc.type.es.fl_str_mv | Artículo |
dc.type.none.fl_str_mv | info:eu-repo/semantics/article |
dc.type.version.none.fl_str_mv | info:eu-repo/semantics/publishedVersion |
description | Grassland biomes provide valuable ecosystem services, including nutrient cycling. Organic phosphorus (Po) represents more than half of the total P in soils. Soil microorganisms release organic P through enzymatic processes, with alkaline phosphatases, acid phosphatases and phytases being the key P enzymes involved in the cycling of organic P. This study analysed 74 soil metagenomes from 17 different grassland biomes worldwide to evaluate the distribution and abundance of eight key P enzymes (PhoD, PhoX, PhoA, Nsap-A, Nsap-B, Nsap-C, BPP and CPhy) and their relationship with environmental factors. Our analyses showed that alkaline phosphatase phoD was the dataset’s most abundant P-enzyme encoding genes, with a wide phylogenetic distribution. Followed by the acid phosphatases Nsap-A and Nsap-C showed similar abundance but a different distribution in their respective phylogenetic trees. Multivariate analyses revealed that pH, Tmax, SOC and soil moisture were associated with the abundance and diversity of all genes studied. PhoD and phoX genes strongly correlated with SOC and clay, and the phoX gene was more common in soils with low to medium SOC and neutral pH. In particular, P-enzyme genes tended to respond in a positively correlated manner among them, suggesting a complex relationship of abundance and diversity among them. |
eu_rights_str_mv | openAccess |
format | article |
id | COLIBRI_a8864b1100fe01fc77395bbbfee49f53 |
identifier_str_mv | Garaycochea Solsona, S, Altier, N, Leoni, C [y otros autores]. "Abundance and phylogenetic distribution of eight key enzymes of the phosphorus biogeochemical cycle in grassland soils". Environmental Microbiology Reports. [en línea] 2023, 15(5): 352–369. 18 h. DOI: 10.1111/1758-2229.13159. 1758-2229 10.1111/1758-2229.13159 |
instacron_str | Universidad de la República |
institution | Universidad de la República |
instname_str | Universidad de la República |
language | eng |
language_invalid_str_mv | en |
network_acronym_str | COLIBRI |
network_name_str | COLIBRI |
oai_identifier_str | oai:colibri.udelar.edu.uy:20.500.12008/43181 |
publishDate | 2023 |
reponame_str | COLIBRI |
repository.mail.fl_str_mv | mabel.seroubian@seciu.edu.uy |
repository.name.fl_str_mv | COLIBRI - Universidad de la República |
repository_id_str | 4771 |
rights_invalid_str_mv | Licencia Creative Commons Atribución (CC - By 4.0) |
spelling | Garaycochea Solsona Silvia, INIAAltier Nora Adriana, INIALeoni Carolina, INIANeal Andrew L.Romero Brunetto Héctor Gabriel, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Biología.2024-03-19T12:46:47Z2024-03-19T12:46:47Z2023Garaycochea Solsona, S, Altier, N, Leoni, C [y otros autores]. "Abundance and phylogenetic distribution of eight key enzymes of the phosphorus biogeochemical cycle in grassland soils". Environmental Microbiology Reports. [en línea] 2023, 15(5): 352–369. 18 h. DOI: 10.1111/1758-2229.13159.1758-2229https://hdl.handle.net/20.500.12008/4318110.1111/1758-2229.13159Grassland biomes provide valuable ecosystem services, including nutrient cycling. Organic phosphorus (Po) represents more than half of the total P in soils. Soil microorganisms release organic P through enzymatic processes, with alkaline phosphatases, acid phosphatases and phytases being the key P enzymes involved in the cycling of organic P. This study analysed 74 soil metagenomes from 17 different grassland biomes worldwide to evaluate the distribution and abundance of eight key P enzymes (PhoD, PhoX, PhoA, Nsap-A, Nsap-B, Nsap-C, BPP and CPhy) and their relationship with environmental factors. Our analyses showed that alkaline phosphatase phoD was the dataset’s most abundant P-enzyme encoding genes, with a wide phylogenetic distribution. Followed by the acid phosphatases Nsap-A and Nsap-C showed similar abundance but a different distribution in their respective phylogenetic trees. Multivariate analyses revealed that pH, Tmax, SOC and soil moisture were associated with the abundance and diversity of all genes studied. PhoD and phoX genes strongly correlated with SOC and clay, and the phoX gene was more common in soils with low to medium SOC and neutral pH. In particular, P-enzyme genes tended to respond in a positively correlated manner among them, suggesting a complex relationship of abundance and diversity among them.Submitted by Pintos Natalia (nataliapintosmvd@gmail.com) on 2024-03-18T14:30:52Z No. of bitstreams: 2 license_rdf: 24251 bytes, checksum: 71ed42ef0a0b648670f707320be37b90 (MD5) 10.1111.1758-2229.13159.pdf: 5658894 bytes, checksum: 7fe20485b29732b48236e71fd502b533 (MD5)Approved for entry into archive by Faget Cecilia (lfaget@fcien.edu.uy) on 2024-03-19T12:24:11Z (GMT) No. of bitstreams: 2 license_rdf: 24251 bytes, checksum: 71ed42ef0a0b648670f707320be37b90 (MD5) 10.1111.1758-2229.13159.pdf: 5658894 bytes, checksum: 7fe20485b29732b48236e71fd502b533 (MD5)Made available in DSpace by Luna Fabiana (fabiana.luna@seciu.edu.uy) on 2024-03-19T12:46:47Z (GMT). No. of bitstreams: 2 license_rdf: 24251 bytes, checksum: 71ed42ef0a0b648670f707320be37b90 (MD5) 10.1111.1758-2229.13159.pdf: 5658894 bytes, checksum: 7fe20485b29732b48236e71fd502b533 (MD5) Previous issue date: 2023ANII: POS_NAC_2015_1_11007518 h.application/pdfenengWileyEnvironmental Microbiology Reports, 2023, 15(5): 352–369.Las obras depositadas en el Repositorio se rigen por la Ordenanza de los Derechos de la Propiedad Intelectual de la Universidad de la República.(Res. Nº 91 de C.D.C. de 8/III/1994 – D.O. 7/IV/1994) y por la Ordenanza del Repositorio Abierto de la Universidad de la República (Res. Nº 16 de C.D.C. de 07/10/2014)info:eu-repo/semantics/openAccessLicencia Creative Commons Atribución (CC - By 4.0)Abundance and phylogenetic distribution of eight key enzymes of the phosphorus biogeochemical cycle in grassland soilsArtículoinfo:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionreponame:COLIBRIinstname:Universidad de la Repúblicainstacron:Universidad de la RepúblicaGaraycochea Solsona, SilviaAltier, Nora AdrianaLeoni, CarolinaNeal, Andrew L.Romero Brunetto, Héctor GabrielLICENSElicense.txtlicense.txttext/plain; charset=utf-84267http://localhost:8080/xmlui/bitstream/20.500.12008/43181/5/license.txt6429389a7df7277b72b7924fdc7d47a9MD55CC-LICENSElicense_urllicense_urltext/plain; charset=utf-844http://localhost:8080/xmlui/bitstream/20.500.12008/43181/2/license_urla0ebbeafb9d2ec7cbb19d7137ebc392cMD52license_textlicense_texttext/html; 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- Universidad de la Repúblicafalse |
spellingShingle | Abundance and phylogenetic distribution of eight key enzymes of the phosphorus biogeochemical cycle in grassland soils Garaycochea Solsona, Silvia |
status_str | publishedVersion |
title | Abundance and phylogenetic distribution of eight key enzymes of the phosphorus biogeochemical cycle in grassland soils |
title_full | Abundance and phylogenetic distribution of eight key enzymes of the phosphorus biogeochemical cycle in grassland soils |
title_fullStr | Abundance and phylogenetic distribution of eight key enzymes of the phosphorus biogeochemical cycle in grassland soils |
title_full_unstemmed | Abundance and phylogenetic distribution of eight key enzymes of the phosphorus biogeochemical cycle in grassland soils |
title_short | Abundance and phylogenetic distribution of eight key enzymes of the phosphorus biogeochemical cycle in grassland soils |
title_sort | Abundance and phylogenetic distribution of eight key enzymes of the phosphorus biogeochemical cycle in grassland soils |
url | https://hdl.handle.net/20.500.12008/43181 |