Multi-tissue Siberian sturgeon RNA sequencing data
Resumen:
Siberian sturgeon, Acipenser baerii, is a commercially valu- able fish for flesh and caviar production and a threatened species. We produced transcriptomic data for ten tissues with relevance to puberty, reproduction, early development, growth and food intake. The data includes RNA-Seq read sets of brain, pituitary, anterior-kidney, kidney, stomach, liver, heart, embryonic, pre-larval, and immature gonad sequences. Tissues were collected from sex differentiated fish (17 to 42 months of age, 66 to 85 cm) RNA was extracted and sequenced. Our purpose is to facilitate fundamental studies of sturgeon physiology to wild and aquaculture populations management.
| 2020 | |
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Siberian sturgeon Transcriptomics Brain-pituitary-gonad axis Anterior-kidney Kidney Stomach Liver Embryos |
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| Inglés | |
| Universidad de la República | |
| COLIBRI | |
| https://hdl.handle.net/20.500.12008/30806 | |
| Acceso abierto | |
| Licencia Creative Commons Atribución (CC - By 4.0) |
| _version_ | 1807522788215357440 |
|---|---|
| author | Klopp, C. |
| author2 | Cabau, Cédric Lasalle Gerla, André Eduardo Di Landro Francis, Santiago Greif, Gonzalo Vizziano-Cantonnet, Denise |
| author2_role | author author author author author |
| author_facet | Klopp, C. Cabau, Cédric Lasalle Gerla, André Eduardo Di Landro Francis, Santiago Greif, Gonzalo Vizziano-Cantonnet, Denise |
| author_role | author |
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| collection | COLIBRI |
| dc.contributor.filiacion.none.fl_str_mv | Klopp C. Cabau Cédric, Institut Pasteur (Uruguay) Lasalle Gerla André Eduardo, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Biología. Di Landro Francis Santiago, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Biología. Greif Gonzalo, Institut Pasteur (Uruguay) Vizziano-Cantonnet Denise, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Biología. |
| dc.creator.none.fl_str_mv | Klopp, C. Cabau, Cédric Lasalle Gerla, André Eduardo Di Landro Francis, Santiago Greif, Gonzalo Vizziano-Cantonnet, Denise |
| dc.date.accessioned.none.fl_str_mv | 2022-02-09T13:05:49Z |
| dc.date.available.none.fl_str_mv | 2022-02-09T13:05:49Z |
| dc.date.issued.none.fl_str_mv | 2020 |
| dc.description.abstract.none.fl_txt_mv | Siberian sturgeon, Acipenser baerii, is a commercially valu- able fish for flesh and caviar production and a threatened species. We produced transcriptomic data for ten tissues with relevance to puberty, reproduction, early development, growth and food intake. The data includes RNA-Seq read sets of brain, pituitary, anterior-kidney, kidney, stomach, liver, heart, embryonic, pre-larval, and immature gonad sequences. Tissues were collected from sex differentiated fish (17 to 42 months of age, 66 to 85 cm) RNA was extracted and sequenced. Our purpose is to facilitate fundamental studies of sturgeon physiology to wild and aquaculture populations management. |
| dc.format.extent.es.fl_str_mv | 7 h. |
| dc.format.mimetype.es.fl_str_mv | application/pdf |
| dc.identifier.citation.es.fl_str_mv | Klopp, C, Cabau, C, Lasalle Gerla, A, Di Landro, S, [y otros] "Multi-tissue Siberian sturgeon RNA sequencing data". Data in Brief. [en línea] 2020, 31:105820. 7 h. DOI: 10.1016/j.dib.2020.105820 |
| dc.identifier.doi.none.fl_str_mv | 10.1016/j.dib.2020.105820 |
| dc.identifier.issn.none.fl_str_mv | 2352-3409 |
| dc.identifier.uri.none.fl_str_mv | https://hdl.handle.net/20.500.12008/30806 |
| dc.language.iso.none.fl_str_mv | en eng |
| dc.publisher.es.fl_str_mv | Elsevier |
| dc.relation.ispartof.es.fl_str_mv | Data in Brief, 2020, 31: 105820 |
| dc.rights.license.none.fl_str_mv | Licencia Creative Commons Atribución (CC - By 4.0) |
| dc.rights.none.fl_str_mv | info:eu-repo/semantics/openAccess |
| dc.source.none.fl_str_mv | reponame:COLIBRI instname:Universidad de la República instacron:Universidad de la República |
| dc.subject.es.fl_str_mv | Siberian sturgeon Transcriptomics Brain-pituitary-gonad axis Anterior-kidney Kidney Stomach Liver Embryos |
| dc.title.none.fl_str_mv | Multi-tissue Siberian sturgeon RNA sequencing data |
| dc.type.es.fl_str_mv | Artículo |
| dc.type.none.fl_str_mv | info:eu-repo/semantics/article |
| dc.type.version.none.fl_str_mv | info:eu-repo/semantics/publishedVersion |
| description | Siberian sturgeon, Acipenser baerii, is a commercially valu- able fish for flesh and caviar production and a threatened species. We produced transcriptomic data for ten tissues with relevance to puberty, reproduction, early development, growth and food intake. The data includes RNA-Seq read sets of brain, pituitary, anterior-kidney, kidney, stomach, liver, heart, embryonic, pre-larval, and immature gonad sequences. Tissues were collected from sex differentiated fish (17 to 42 months of age, 66 to 85 cm) RNA was extracted and sequenced. Our purpose is to facilitate fundamental studies of sturgeon physiology to wild and aquaculture populations management. |
| eu_rights_str_mv | openAccess |
| format | article |
| id | COLIBRI_8c6e7b44d8ffca445fa3f528093e20f2 |
| identifier_str_mv | Klopp, C, Cabau, C, Lasalle Gerla, A, Di Landro, S, [y otros] "Multi-tissue Siberian sturgeon RNA sequencing data". Data in Brief. [en línea] 2020, 31:105820. 7 h. DOI: 10.1016/j.dib.2020.105820 2352-3409 10.1016/j.dib.2020.105820 |
| instacron_str | Universidad de la República |
| institution | Universidad de la República |
| instname_str | Universidad de la República |
| language | eng |
| language_invalid_str_mv | en |
| network_acronym_str | COLIBRI |
| network_name_str | COLIBRI |
| oai_identifier_str | oai:colibri.udelar.edu.uy:20.500.12008/30806 |
| publishDate | 2020 |
| reponame_str | COLIBRI |
| repository.mail.fl_str_mv | mabel.seroubian@seciu.edu.uy |
| repository.name.fl_str_mv | COLIBRI - Universidad de la República |
| repository_id_str | 4771 |
| rights_invalid_str_mv | Licencia Creative Commons Atribución (CC - By 4.0) |
| spelling | Klopp C.Cabau Cédric, Institut Pasteur (Uruguay)Lasalle Gerla André Eduardo, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Biología.Di Landro Francis Santiago, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Biología.Greif Gonzalo, Institut Pasteur (Uruguay)Vizziano-Cantonnet Denise, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Biología.2022-02-09T13:05:49Z2022-02-09T13:05:49Z2020Klopp, C, Cabau, C, Lasalle Gerla, A, Di Landro, S, [y otros] "Multi-tissue Siberian sturgeon RNA sequencing data". Data in Brief. [en línea] 2020, 31:105820. 7 h. DOI: 10.1016/j.dib.2020.1058202352-3409https://hdl.handle.net/20.500.12008/3080610.1016/j.dib.2020.105820Siberian sturgeon, Acipenser baerii, is a commercially valu- able fish for flesh and caviar production and a threatened species. We produced transcriptomic data for ten tissues with relevance to puberty, reproduction, early development, growth and food intake. The data includes RNA-Seq read sets of brain, pituitary, anterior-kidney, kidney, stomach, liver, heart, embryonic, pre-larval, and immature gonad sequences. Tissues were collected from sex differentiated fish (17 to 42 months of age, 66 to 85 cm) RNA was extracted and sequenced. Our purpose is to facilitate fundamental studies of sturgeon physiology to wild and aquaculture populations management.Submitted by Verdun Juan Pablo (jverdun@fcien.edu.uy) on 2022-02-08T21:14:31Z No. of bitstreams: 2 license_rdf: 19875 bytes, checksum: 9fdbed07f52437945402c4e70fa4773e (MD5) 10.1016j.dib.2020.105820.pdf: 274229 bytes, checksum: 5e318226597dd6ad14eb0c78833516a5 (MD5)Approved for entry into archive by Faget Cecilia (lfaget@fcien.edu.uy) on 2022-02-09T12:30:01Z (GMT) No. of bitstreams: 2 license_rdf: 19875 bytes, checksum: 9fdbed07f52437945402c4e70fa4773e (MD5) 10.1016j.dib.2020.105820.pdf: 274229 bytes, checksum: 5e318226597dd6ad14eb0c78833516a5 (MD5)Made available in DSpace by Luna Fabiana (fabiana.luna@seciu.edu.uy) on 2022-02-09T13:05:49Z (GMT). No. of bitstreams: 2 license_rdf: 19875 bytes, checksum: 9fdbed07f52437945402c4e70fa4773e (MD5) 10.1016j.dib.2020.105820.pdf: 274229 bytes, checksum: 5e318226597dd6ad14eb0c78833516a5 (MD5) Previous issue date: 20207 h.application/pdfenengElsevierData in Brief, 2020, 31: 105820Las obras depositadas en el Repositorio se rigen por la Ordenanza de los Derechos de la Propiedad Intelectual de la Universidad de la República.(Res. Nº 91 de C.D.C. de 8/III/1994 – D.O. 7/IV/1994) y por la Ordenanza del Repositorio Abierto de la Universidad de la República (Res. Nº 16 de C.D.C. de 07/10/2014)info:eu-repo/semantics/openAccessLicencia Creative Commons Atribución (CC - By 4.0)Siberian sturgeonTranscriptomicsBrain-pituitary-gonad axisAnterior-kidneyKidneyStomachLiverEmbryosMulti-tissue Siberian sturgeon RNA sequencing dataArtículoinfo:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionreponame:COLIBRIinstname:Universidad de la Repúblicainstacron:Universidad de la RepúblicaKlopp, C.Cabau, CédricLasalle Gerla, André EduardoDi Landro Francis, SantiagoGreif, GonzaloVizziano-Cantonnet, DeniseLICENSElicense.txtlicense.txttext/plain; charset=utf-84267http://localhost:8080/xmlui/bitstream/20.500.12008/30806/5/license.txt6429389a7df7277b72b7924fdc7d47a9MD55CC-LICENSElicense_urllicense_urltext/plain; charset=utf-844http://localhost:8080/xmlui/bitstream/20.500.12008/30806/2/license_urla0ebbeafb9d2ec7cbb19d7137ebc392cMD52license_textlicense_texttext/html; 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- Universidad de la Repúblicafalse |
| spellingShingle | Multi-tissue Siberian sturgeon RNA sequencing data Klopp, C. Siberian sturgeon Transcriptomics Brain-pituitary-gonad axis Anterior-kidney Kidney Stomach Liver Embryos |
| status_str | publishedVersion |
| title | Multi-tissue Siberian sturgeon RNA sequencing data |
| title_full | Multi-tissue Siberian sturgeon RNA sequencing data |
| title_fullStr | Multi-tissue Siberian sturgeon RNA sequencing data |
| title_full_unstemmed | Multi-tissue Siberian sturgeon RNA sequencing data |
| title_short | Multi-tissue Siberian sturgeon RNA sequencing data |
| title_sort | Multi-tissue Siberian sturgeon RNA sequencing data |
| topic | Siberian sturgeon Transcriptomics Brain-pituitary-gonad axis Anterior-kidney Kidney Stomach Liver Embryos |
| url | https://hdl.handle.net/20.500.12008/30806 |
