Making the genome huge: the case of Triatoma delpontei, a Triatominae species with more than 50% of its genome full of satellite DNA
Resumen:
The genome of Triatoma delpontei Romaña & Abalos 1947 is the largest within Heteroptera, approximately two to three times greater than other evaluated Heteroptera genomes. Here, the repetitive fraction of the genome was determined and compared with its sister species Triatoma infestans Klug 1834, in order to shed light on the karyotypic and genomic evolution of these species. The T. delpontei repeatome analysis showed that the most abundant component in its genome is satellite DNA, which makes up more than half of the genome. The T. delpontei satellitome includes 160 satellite DNA families, most of them also present in T. infestans. In both species, only a few satellite DNA families are overrepresented on the genome. These families are the building blocks of the C-heterochromatic regions. Two of these satellite DNA families that form the heterochromatin are the same in both species. However, there are satellite DNA families highly amplified in the heterochromatin of one species that in the other species are in low abundance and located in the euchromatin. Therefore, the present results depicted the great impact of the satellite DNA sequences in the evolution of Triatominae genomes. Within this scenario, satellitome determination and analysis led to a hypothesis that explains how satDNA sequences have grown on T. delpontei to reach its huge genome size within true bugs.
2023 | |
Triatominae Chagas disease vectors Repetitive DNA Satellite DNA Satellitome Genome evolution Fluorescence in situ hybridization |
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Inglés | |
Universidad de la República | |
COLIBRI | |
https://hdl.handle.net/20.500.12008/43276 | |
Acceso abierto | |
Licencia Creative Commons Atribución (CC - By 4.0) |
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---|---|
author | Mora, Pablo |
author2 | Pita Mimbacas, Sebastián Montiel, Eugenia E. Rico-Porras, José M. Palomeque, Teresa Panzera Arballo, Francisco Lorite, Pedro |
author2_role | author author author author author author |
author_facet | Mora, Pablo Pita Mimbacas, Sebastián Montiel, Eugenia E. Rico-Porras, José M. Palomeque, Teresa Panzera Arballo, Francisco Lorite, Pedro |
author_role | author |
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collection | COLIBRI |
dc.contributor.filiacion.none.fl_str_mv | Mora Pablo Pita Mimbacas Sebastián, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Biología. Montiel Eugenia E. Rico-Porras José M. Palomeque Teresa Panzera Arballo Francisco, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Biología. Lorite Pedro |
dc.creator.none.fl_str_mv | Mora, Pablo Pita Mimbacas, Sebastián Montiel, Eugenia E. Rico-Porras, José M. Palomeque, Teresa Panzera Arballo, Francisco Lorite, Pedro |
dc.date.accessioned.none.fl_str_mv | 2024-04-01T14:00:32Z |
dc.date.available.none.fl_str_mv | 2024-04-01T14:00:32Z |
dc.date.issued.none.fl_str_mv | 2023 |
dc.description.abstract.none.fl_txt_mv | The genome of Triatoma delpontei Romaña & Abalos 1947 is the largest within Heteroptera, approximately two to three times greater than other evaluated Heteroptera genomes. Here, the repetitive fraction of the genome was determined and compared with its sister species Triatoma infestans Klug 1834, in order to shed light on the karyotypic and genomic evolution of these species. The T. delpontei repeatome analysis showed that the most abundant component in its genome is satellite DNA, which makes up more than half of the genome. The T. delpontei satellitome includes 160 satellite DNA families, most of them also present in T. infestans. In both species, only a few satellite DNA families are overrepresented on the genome. These families are the building blocks of the C-heterochromatic regions. Two of these satellite DNA families that form the heterochromatin are the same in both species. However, there are satellite DNA families highly amplified in the heterochromatin of one species that in the other species are in low abundance and located in the euchromatin. Therefore, the present results depicted the great impact of the satellite DNA sequences in the evolution of Triatominae genomes. Within this scenario, satellitome determination and analysis led to a hypothesis that explains how satDNA sequences have grown on T. delpontei to reach its huge genome size within true bugs. |
dc.format.extent.es.fl_str_mv | 20 h. |
dc.format.mimetype.es.fl_str_mv | application/pdf |
dc.identifier.citation.es.fl_str_mv | Mora, P, Pita Mimbacas, S, Montiel, E [y otros autores]. "Making the genome huge: the case of Triatoma delpontei, a Triatominae species with more than 50% of its genome full of satellite DNA". Genes. [en línea] 2023, 14(2): 371. 20 h. DOI: 10.3390/genes14020371. |
dc.identifier.doi.none.fl_str_mv | 10.3390/genes14020371 |
dc.identifier.issn.none.fl_str_mv | 2073-4425 |
dc.identifier.uri.none.fl_str_mv | https://hdl.handle.net/20.500.12008/43276 |
dc.language.iso.none.fl_str_mv | en eng |
dc.publisher.es.fl_str_mv | MDPI |
dc.relation.ispartof.es.fl_str_mv | Genes, 2023, 14(2): 371. |
dc.rights.license.none.fl_str_mv | Licencia Creative Commons Atribución (CC - By 4.0) |
dc.rights.none.fl_str_mv | info:eu-repo/semantics/openAccess |
dc.source.none.fl_str_mv | reponame:COLIBRI instname:Universidad de la República instacron:Universidad de la República |
dc.subject.es.fl_str_mv | Triatominae Chagas disease vectors Repetitive DNA Satellite DNA Satellitome Genome evolution Fluorescence in situ hybridization |
dc.title.none.fl_str_mv | Making the genome huge: the case of Triatoma delpontei, a Triatominae species with more than 50% of its genome full of satellite DNA |
dc.type.es.fl_str_mv | Artículo |
dc.type.none.fl_str_mv | info:eu-repo/semantics/article |
dc.type.version.none.fl_str_mv | info:eu-repo/semantics/publishedVersion |
description | The genome of Triatoma delpontei Romaña & Abalos 1947 is the largest within Heteroptera, approximately two to three times greater than other evaluated Heteroptera genomes. Here, the repetitive fraction of the genome was determined and compared with its sister species Triatoma infestans Klug 1834, in order to shed light on the karyotypic and genomic evolution of these species. The T. delpontei repeatome analysis showed that the most abundant component in its genome is satellite DNA, which makes up more than half of the genome. The T. delpontei satellitome includes 160 satellite DNA families, most of them also present in T. infestans. In both species, only a few satellite DNA families are overrepresented on the genome. These families are the building blocks of the C-heterochromatic regions. Two of these satellite DNA families that form the heterochromatin are the same in both species. However, there are satellite DNA families highly amplified in the heterochromatin of one species that in the other species are in low abundance and located in the euchromatin. Therefore, the present results depicted the great impact of the satellite DNA sequences in the evolution of Triatominae genomes. Within this scenario, satellitome determination and analysis led to a hypothesis that explains how satDNA sequences have grown on T. delpontei to reach its huge genome size within true bugs. |
eu_rights_str_mv | openAccess |
format | article |
id | COLIBRI_8b8414da7f461959c25f8e47befc605b |
identifier_str_mv | Mora, P, Pita Mimbacas, S, Montiel, E [y otros autores]. "Making the genome huge: the case of Triatoma delpontei, a Triatominae species with more than 50% of its genome full of satellite DNA". Genes. [en línea] 2023, 14(2): 371. 20 h. DOI: 10.3390/genes14020371. 2073-4425 10.3390/genes14020371 |
instacron_str | Universidad de la República |
institution | Universidad de la República |
instname_str | Universidad de la República |
language | eng |
language_invalid_str_mv | en |
network_acronym_str | COLIBRI |
network_name_str | COLIBRI |
oai_identifier_str | oai:colibri.udelar.edu.uy:20.500.12008/43276 |
publishDate | 2023 |
reponame_str | COLIBRI |
repository.mail.fl_str_mv | mabel.seroubian@seciu.edu.uy |
repository.name.fl_str_mv | COLIBRI - Universidad de la República |
repository_id_str | 4771 |
rights_invalid_str_mv | Licencia Creative Commons Atribución (CC - By 4.0) |
spelling | Mora PabloPita Mimbacas Sebastián, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Biología.Montiel Eugenia E.Rico-Porras José M.Palomeque TeresaPanzera Arballo Francisco, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Biología.Lorite Pedro2024-04-01T14:00:32Z2024-04-01T14:00:32Z2023Mora, P, Pita Mimbacas, S, Montiel, E [y otros autores]. "Making the genome huge: the case of Triatoma delpontei, a Triatominae species with more than 50% of its genome full of satellite DNA". Genes. [en línea] 2023, 14(2): 371. 20 h. DOI: 10.3390/genes14020371.2073-4425https://hdl.handle.net/20.500.12008/4327610.3390/genes14020371The genome of Triatoma delpontei Romaña & Abalos 1947 is the largest within Heteroptera, approximately two to three times greater than other evaluated Heteroptera genomes. Here, the repetitive fraction of the genome was determined and compared with its sister species Triatoma infestans Klug 1834, in order to shed light on the karyotypic and genomic evolution of these species. The T. delpontei repeatome analysis showed that the most abundant component in its genome is satellite DNA, which makes up more than half of the genome. The T. delpontei satellitome includes 160 satellite DNA families, most of them also present in T. infestans. In both species, only a few satellite DNA families are overrepresented on the genome. These families are the building blocks of the C-heterochromatic regions. Two of these satellite DNA families that form the heterochromatin are the same in both species. However, there are satellite DNA families highly amplified in the heterochromatin of one species that in the other species are in low abundance and located in the euchromatin. Therefore, the present results depicted the great impact of the satellite DNA sequences in the evolution of Triatominae genomes. Within this scenario, satellitome determination and analysis led to a hypothesis that explains how satDNA sequences have grown on T. delpontei to reach its huge genome size within true bugs.Submitted by Pintos Natalia (nataliapintosmvd@gmail.com) on 2024-03-22T16:13:00Z No. of bitstreams: 2 license_rdf: 24251 bytes, checksum: 71ed42ef0a0b648670f707320be37b90 (MD5) 10.3390.genes14020371.pdf: 13790794 bytes, checksum: 6864393bb09cd5e3fe5078178eee138b (MD5)Approved for entry into archive by Faget Cecilia (lfaget@fcien.edu.uy) on 2024-04-01T13:45:22Z (GMT) No. of bitstreams: 2 license_rdf: 24251 bytes, checksum: 71ed42ef0a0b648670f707320be37b90 (MD5) 10.3390.genes14020371.pdf: 13790794 bytes, checksum: 6864393bb09cd5e3fe5078178eee138b (MD5)Made available in DSpace by Luna Fabiana (fabiana.luna@seciu.edu.uy) on 2024-04-01T14:00:32Z (GMT). No. of bitstreams: 2 license_rdf: 24251 bytes, checksum: 71ed42ef0a0b648670f707320be37b90 (MD5) 10.3390.genes14020371.pdf: 13790794 bytes, checksum: 6864393bb09cd5e3fe5078178eee138b (MD5) Previous issue date: 202320 h.application/pdfenengMDPIGenes, 2023, 14(2): 371.Las obras depositadas en el Repositorio se rigen por la Ordenanza de los Derechos de la Propiedad Intelectual de la Universidad de la República.(Res. Nº 91 de C.D.C. de 8/III/1994 – D.O. 7/IV/1994) y por la Ordenanza del Repositorio Abierto de la Universidad de la República (Res. Nº 16 de C.D.C. de 07/10/2014)info:eu-repo/semantics/openAccessLicencia Creative Commons Atribución (CC - By 4.0)TriatominaeChagas disease vectorsRepetitive DNASatellite DNASatellitomeGenome evolutionFluorescence in situ hybridizationMaking the genome huge: the case of Triatoma delpontei, a Triatominae species with more than 50% of its genome full of satellite DNAArtículoinfo:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionreponame:COLIBRIinstname:Universidad de la Repúblicainstacron:Universidad de la RepúblicaMora, PabloPita Mimbacas, SebastiánMontiel, Eugenia E.Rico-Porras, José M.Palomeque, TeresaPanzera Arballo, FranciscoLorite, PedroLICENSElicense.txtlicense.txttext/plain; charset=utf-84267http://localhost:8080/xmlui/bitstream/20.500.12008/43276/5/license.txt6429389a7df7277b72b7924fdc7d47a9MD55CC-LICENSElicense_urllicense_urltext/plain; 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- Universidad de la Repúblicafalse |
spellingShingle | Making the genome huge: the case of Triatoma delpontei, a Triatominae species with more than 50% of its genome full of satellite DNA Mora, Pablo Triatominae Chagas disease vectors Repetitive DNA Satellite DNA Satellitome Genome evolution Fluorescence in situ hybridization |
status_str | publishedVersion |
title | Making the genome huge: the case of Triatoma delpontei, a Triatominae species with more than 50% of its genome full of satellite DNA |
title_full | Making the genome huge: the case of Triatoma delpontei, a Triatominae species with more than 50% of its genome full of satellite DNA |
title_fullStr | Making the genome huge: the case of Triatoma delpontei, a Triatominae species with more than 50% of its genome full of satellite DNA |
title_full_unstemmed | Making the genome huge: the case of Triatoma delpontei, a Triatominae species with more than 50% of its genome full of satellite DNA |
title_short | Making the genome huge: the case of Triatoma delpontei, a Triatominae species with more than 50% of its genome full of satellite DNA |
title_sort | Making the genome huge: the case of Triatoma delpontei, a Triatominae species with more than 50% of its genome full of satellite DNA |
topic | Triatominae Chagas disease vectors Repetitive DNA Satellite DNA Satellitome Genome evolution Fluorescence in situ hybridization |
url | https://hdl.handle.net/20.500.12008/43276 |