Making the genome huge: the case of Triatoma delpontei, a Triatominae species with more than 50% of its genome full of satellite DNA

Mora, Pablo - Pita Mimbacas, Sebastián - Montiel, Eugenia E. - Rico-Porras, José M. - Palomeque, Teresa - Panzera Arballo, Francisco - Lorite, Pedro

Resumen:

The genome of Triatoma delpontei Romaña & Abalos 1947 is the largest within Heteroptera, approximately two to three times greater than other evaluated Heteroptera genomes. Here, the repetitive fraction of the genome was determined and compared with its sister species Triatoma infestans Klug 1834, in order to shed light on the karyotypic and genomic evolution of these species. The T. delpontei repeatome analysis showed that the most abundant component in its genome is satellite DNA, which makes up more than half of the genome. The T. delpontei satellitome includes 160 satellite DNA families, most of them also present in T. infestans. In both species, only a few satellite DNA families are overrepresented on the genome. These families are the building blocks of the C-heterochromatic regions. Two of these satellite DNA families that form the heterochromatin are the same in both species. However, there are satellite DNA families highly amplified in the heterochromatin of one species that in the other species are in low abundance and located in the euchromatin. Therefore, the present results depicted the great impact of the satellite DNA sequences in the evolution of Triatominae genomes. Within this scenario, satellitome determination and analysis led to a hypothesis that explains how satDNA sequences have grown on T. delpontei to reach its huge genome size within true bugs.


Detalles Bibliográficos
2023
Triatominae
Chagas disease vectors
Repetitive DNA
Satellite DNA
Satellitome
Genome evolution
Fluorescence in situ hybridization
Inglés
Universidad de la República
COLIBRI
https://hdl.handle.net/20.500.12008/43276
Acceso abierto
Licencia Creative Commons Atribución (CC - By 4.0)
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author Mora, Pablo
author2 Pita Mimbacas, Sebastián
Montiel, Eugenia E.
Rico-Porras, José M.
Palomeque, Teresa
Panzera Arballo, Francisco
Lorite, Pedro
author2_role author
author
author
author
author
author
author_facet Mora, Pablo
Pita Mimbacas, Sebastián
Montiel, Eugenia E.
Rico-Porras, José M.
Palomeque, Teresa
Panzera Arballo, Francisco
Lorite, Pedro
author_role author
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collection COLIBRI
dc.contributor.filiacion.none.fl_str_mv Mora Pablo
Pita Mimbacas Sebastián, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Biología.
Montiel Eugenia E.
Rico-Porras José M.
Palomeque Teresa
Panzera Arballo Francisco, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Biología.
Lorite Pedro
dc.creator.none.fl_str_mv Mora, Pablo
Pita Mimbacas, Sebastián
Montiel, Eugenia E.
Rico-Porras, José M.
Palomeque, Teresa
Panzera Arballo, Francisco
Lorite, Pedro
dc.date.accessioned.none.fl_str_mv 2024-04-01T14:00:32Z
dc.date.available.none.fl_str_mv 2024-04-01T14:00:32Z
dc.date.issued.none.fl_str_mv 2023
dc.description.abstract.none.fl_txt_mv The genome of Triatoma delpontei Romaña & Abalos 1947 is the largest within Heteroptera, approximately two to three times greater than other evaluated Heteroptera genomes. Here, the repetitive fraction of the genome was determined and compared with its sister species Triatoma infestans Klug 1834, in order to shed light on the karyotypic and genomic evolution of these species. The T. delpontei repeatome analysis showed that the most abundant component in its genome is satellite DNA, which makes up more than half of the genome. The T. delpontei satellitome includes 160 satellite DNA families, most of them also present in T. infestans. In both species, only a few satellite DNA families are overrepresented on the genome. These families are the building blocks of the C-heterochromatic regions. Two of these satellite DNA families that form the heterochromatin are the same in both species. However, there are satellite DNA families highly amplified in the heterochromatin of one species that in the other species are in low abundance and located in the euchromatin. Therefore, the present results depicted the great impact of the satellite DNA sequences in the evolution of Triatominae genomes. Within this scenario, satellitome determination and analysis led to a hypothesis that explains how satDNA sequences have grown on T. delpontei to reach its huge genome size within true bugs.
dc.format.extent.es.fl_str_mv 20 h.
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dc.identifier.citation.es.fl_str_mv Mora, P, Pita Mimbacas, S, Montiel, E [y otros autores]. "Making the genome huge: the case of Triatoma delpontei, a Triatominae species with more than 50% of its genome full of satellite DNA". Genes. [en línea] 2023, 14(2): 371. 20 h. DOI: 10.3390/genes14020371.
dc.identifier.doi.none.fl_str_mv 10.3390/genes14020371
dc.identifier.issn.none.fl_str_mv 2073-4425
dc.identifier.uri.none.fl_str_mv https://hdl.handle.net/20.500.12008/43276
dc.language.iso.none.fl_str_mv en
eng
dc.publisher.es.fl_str_mv MDPI
dc.relation.ispartof.es.fl_str_mv Genes, 2023, 14(2): 371.
dc.rights.license.none.fl_str_mv Licencia Creative Commons Atribución (CC - By 4.0)
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
dc.source.none.fl_str_mv reponame:COLIBRI
instname:Universidad de la República
instacron:Universidad de la República
dc.subject.es.fl_str_mv Triatominae
Chagas disease vectors
Repetitive DNA
Satellite DNA
Satellitome
Genome evolution
Fluorescence in situ hybridization
dc.title.none.fl_str_mv Making the genome huge: the case of Triatoma delpontei, a Triatominae species with more than 50% of its genome full of satellite DNA
dc.type.es.fl_str_mv Artículo
dc.type.none.fl_str_mv info:eu-repo/semantics/article
dc.type.version.none.fl_str_mv info:eu-repo/semantics/publishedVersion
description The genome of Triatoma delpontei Romaña & Abalos 1947 is the largest within Heteroptera, approximately two to three times greater than other evaluated Heteroptera genomes. Here, the repetitive fraction of the genome was determined and compared with its sister species Triatoma infestans Klug 1834, in order to shed light on the karyotypic and genomic evolution of these species. The T. delpontei repeatome analysis showed that the most abundant component in its genome is satellite DNA, which makes up more than half of the genome. The T. delpontei satellitome includes 160 satellite DNA families, most of them also present in T. infestans. In both species, only a few satellite DNA families are overrepresented on the genome. These families are the building blocks of the C-heterochromatic regions. Two of these satellite DNA families that form the heterochromatin are the same in both species. However, there are satellite DNA families highly amplified in the heterochromatin of one species that in the other species are in low abundance and located in the euchromatin. Therefore, the present results depicted the great impact of the satellite DNA sequences in the evolution of Triatominae genomes. Within this scenario, satellitome determination and analysis led to a hypothesis that explains how satDNA sequences have grown on T. delpontei to reach its huge genome size within true bugs.
eu_rights_str_mv openAccess
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identifier_str_mv Mora, P, Pita Mimbacas, S, Montiel, E [y otros autores]. "Making the genome huge: the case of Triatoma delpontei, a Triatominae species with more than 50% of its genome full of satellite DNA". Genes. [en línea] 2023, 14(2): 371. 20 h. DOI: 10.3390/genes14020371.
2073-4425
10.3390/genes14020371
instacron_str Universidad de la República
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instname_str Universidad de la República
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publishDate 2023
reponame_str COLIBRI
repository.mail.fl_str_mv mabel.seroubian@seciu.edu.uy
repository.name.fl_str_mv COLIBRI - Universidad de la República
repository_id_str 4771
rights_invalid_str_mv Licencia Creative Commons Atribución (CC - By 4.0)
spelling Mora PabloPita Mimbacas Sebastián, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Biología.Montiel Eugenia E.Rico-Porras José M.Palomeque TeresaPanzera Arballo Francisco, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Biología.Lorite Pedro2024-04-01T14:00:32Z2024-04-01T14:00:32Z2023Mora, P, Pita Mimbacas, S, Montiel, E [y otros autores]. "Making the genome huge: the case of Triatoma delpontei, a Triatominae species with more than 50% of its genome full of satellite DNA". Genes. [en línea] 2023, 14(2): 371. 20 h. DOI: 10.3390/genes14020371.2073-4425https://hdl.handle.net/20.500.12008/4327610.3390/genes14020371The genome of Triatoma delpontei Romaña & Abalos 1947 is the largest within Heteroptera, approximately two to three times greater than other evaluated Heteroptera genomes. Here, the repetitive fraction of the genome was determined and compared with its sister species Triatoma infestans Klug 1834, in order to shed light on the karyotypic and genomic evolution of these species. The T. delpontei repeatome analysis showed that the most abundant component in its genome is satellite DNA, which makes up more than half of the genome. The T. delpontei satellitome includes 160 satellite DNA families, most of them also present in T. infestans. In both species, only a few satellite DNA families are overrepresented on the genome. These families are the building blocks of the C-heterochromatic regions. Two of these satellite DNA families that form the heterochromatin are the same in both species. However, there are satellite DNA families highly amplified in the heterochromatin of one species that in the other species are in low abundance and located in the euchromatin. Therefore, the present results depicted the great impact of the satellite DNA sequences in the evolution of Triatominae genomes. Within this scenario, satellitome determination and analysis led to a hypothesis that explains how satDNA sequences have grown on T. delpontei to reach its huge genome size within true bugs.Submitted by Pintos Natalia (nataliapintosmvd@gmail.com) on 2024-03-22T16:13:00Z No. of bitstreams: 2 license_rdf: 24251 bytes, checksum: 71ed42ef0a0b648670f707320be37b90 (MD5) 10.3390.genes14020371.pdf: 13790794 bytes, checksum: 6864393bb09cd5e3fe5078178eee138b (MD5)Approved for entry into archive by Faget Cecilia (lfaget@fcien.edu.uy) on 2024-04-01T13:45:22Z (GMT) No. of bitstreams: 2 license_rdf: 24251 bytes, checksum: 71ed42ef0a0b648670f707320be37b90 (MD5) 10.3390.genes14020371.pdf: 13790794 bytes, checksum: 6864393bb09cd5e3fe5078178eee138b (MD5)Made available in DSpace by Luna Fabiana (fabiana.luna@seciu.edu.uy) on 2024-04-01T14:00:32Z (GMT). No. of bitstreams: 2 license_rdf: 24251 bytes, checksum: 71ed42ef0a0b648670f707320be37b90 (MD5) 10.3390.genes14020371.pdf: 13790794 bytes, checksum: 6864393bb09cd5e3fe5078178eee138b (MD5) Previous issue date: 202320 h.application/pdfenengMDPIGenes, 2023, 14(2): 371.Las obras depositadas en el Repositorio se rigen por la Ordenanza de los Derechos de la Propiedad Intelectual de la Universidad de la República.(Res. Nº 91 de C.D.C. de 8/III/1994 – D.O. 7/IV/1994) y por la Ordenanza del Repositorio Abierto de la Universidad de la República (Res. Nº 16 de C.D.C. de 07/10/2014)info:eu-repo/semantics/openAccessLicencia Creative Commons Atribución (CC - By 4.0)TriatominaeChagas disease vectorsRepetitive DNASatellite DNASatellitomeGenome evolutionFluorescence in situ hybridizationMaking the genome huge: the case of Triatoma delpontei, a Triatominae species with more than 50% of its genome full of satellite DNAArtículoinfo:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionreponame:COLIBRIinstname:Universidad de la Repúblicainstacron:Universidad de la RepúblicaMora, PabloPita Mimbacas, SebastiánMontiel, Eugenia E.Rico-Porras, José M.Palomeque, TeresaPanzera Arballo, FranciscoLorite, PedroLICENSElicense.txtlicense.txttext/plain; charset=utf-84267http://localhost:8080/xmlui/bitstream/20.500.12008/43276/5/license.txt6429389a7df7277b72b7924fdc7d47a9MD55CC-LICENSElicense_urllicense_urltext/plain; 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- Universidad de la Repúblicafalse
spellingShingle Making the genome huge: the case of Triatoma delpontei, a Triatominae species with more than 50% of its genome full of satellite DNA
Mora, Pablo
Triatominae
Chagas disease vectors
Repetitive DNA
Satellite DNA
Satellitome
Genome evolution
Fluorescence in situ hybridization
status_str publishedVersion
title Making the genome huge: the case of Triatoma delpontei, a Triatominae species with more than 50% of its genome full of satellite DNA
title_full Making the genome huge: the case of Triatoma delpontei, a Triatominae species with more than 50% of its genome full of satellite DNA
title_fullStr Making the genome huge: the case of Triatoma delpontei, a Triatominae species with more than 50% of its genome full of satellite DNA
title_full_unstemmed Making the genome huge: the case of Triatoma delpontei, a Triatominae species with more than 50% of its genome full of satellite DNA
title_short Making the genome huge: the case of Triatoma delpontei, a Triatominae species with more than 50% of its genome full of satellite DNA
title_sort Making the genome huge: the case of Triatoma delpontei, a Triatominae species with more than 50% of its genome full of satellite DNA
topic Triatominae
Chagas disease vectors
Repetitive DNA
Satellite DNA
Satellitome
Genome evolution
Fluorescence in situ hybridization
url https://hdl.handle.net/20.500.12008/43276