Quantification of carbonate radical formation by the bicarbonate-dependent peroxidase activity of superoxide dismutase 1 using pyrogallol red bleaching
Resumen:
Carbonate radicals (CO3%-) are generated by the bicarbonate-dependent peroxidase activity of cytosolic superoxide dismutase (Cu,Zn-SOD, SOD-1). The present work explored the use of bleaching of pyrogallol red (PGR) dye to quantify the rate of CO3%- formation from bovine and human SOD-1 (bSOD-1 and hSOD-1, respectively). This approach was compared to previously reported methods using electron paramagnetic resonance spin trapping with DMPO, and the oxidation of ABTS (2,2-azino-bis(3-ethylbenzothiazoline)-6-sulfonic acid). The kinetics of PGR consumption elicited by CO3%- was followed by visible spectrophotometry. Solutions containing PGR (5–200 μM), SOD-1 (0.3–3 μM), H2O2 (2 mM) in bicarbonate buffer (200 mM, pH 7.4) showed a rapid loss of the PGR absorption band centered at 540 nm. The initial consumption rate (Ri) gave values independent of the initial PGR concentration allowing an estimate to be made of the rate of CO3%- release of 24.6±4.3 μM min−1 for 3 μM bSOD-1. Both bSOD-1 and hSOD-1 showed a similar peroxidase activity, with enzymatic inactivation occurring over a period of 20 min. The single Trp residue (Trp32) present in hSOD-1 was rapidly consumed (initial consumption rate 1.2±0.1 μM min−1) with this occurring more rapidly than hSOD-1 inactivation, suggesting that these processes are not directly related. Added free Trp was rapidly oxidized in competition with PGR. These data indicate that PGR reacts rapidly and efficiently with CO3%- resulting from the peroxidase activity of SOD-1, and that PGR-bleaching is a simple, fast and cheap method to quantify CO3%- release from bSOD-1 and hSOD-1 peroxidase activity.
2019 | |
Carbonate radical anion Superoxide dismutase Hydrogen peroxide Pyrogallol red Peroxidase activity Human SOD-1 Bovine SOD-1 EPR DMPO ABTS |
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Inglés | |
Universidad de la República | |
COLIBRI | |
https://hdl.handle.net/20.500.12008/27231 | |
Acceso abierto | |
Licencia Creative Commons Atribución - No Comercial - Sin Derivadas (CC - By-NC-ND 4.0) |
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author | Figueroa, J.D. |
author2 | Fuentes-Lemus, E. Dorta, E. Melin, V. Cortés-Rios, J. Faúndez, M. Contretas, D. Denicola, Ana Álvarez, Beatriz Davies, M.J. López-Alarcón, C. |
author2_role | author author author author author author author author author author |
author_facet | Figueroa, J.D. Fuentes-Lemus, E. Dorta, E. Melin, V. Cortés-Rios, J. Faúndez, M. Contretas, D. Denicola, Ana Álvarez, Beatriz Davies, M.J. López-Alarcón, C. |
author_role | author |
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collection | COLIBRI |
dc.contributor.filiacion.none.fl_str_mv | Figueroa J.D. Fuentes-Lemus E. Dorta E. Melin V. Cortés-Rios J. Faúndez M. Contretas D. Denicola Ana, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Química Biológica. Alvarez Beatriz, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Química Biológica. Davies M.J. López-Alarcón C. |
dc.creator.none.fl_str_mv | Figueroa, J.D. Fuentes-Lemus, E. Dorta, E. Melin, V. Cortés-Rios, J. Faúndez, M. Contretas, D. Denicola, Ana Álvarez, Beatriz Davies, M.J. López-Alarcón, C. |
dc.date.accessioned.none.fl_str_mv | 2021-04-23T14:44:44Z |
dc.date.available.none.fl_str_mv | 2021-04-23T14:44:44Z |
dc.date.issued.none.fl_str_mv | 2019 |
dc.description.abstract.none.fl_txt_mv | Carbonate radicals (CO3%-) are generated by the bicarbonate-dependent peroxidase activity of cytosolic superoxide dismutase (Cu,Zn-SOD, SOD-1). The present work explored the use of bleaching of pyrogallol red (PGR) dye to quantify the rate of CO3%- formation from bovine and human SOD-1 (bSOD-1 and hSOD-1, respectively). This approach was compared to previously reported methods using electron paramagnetic resonance spin trapping with DMPO, and the oxidation of ABTS (2,2-azino-bis(3-ethylbenzothiazoline)-6-sulfonic acid). The kinetics of PGR consumption elicited by CO3%- was followed by visible spectrophotometry. Solutions containing PGR (5–200 μM), SOD-1 (0.3–3 μM), H2O2 (2 mM) in bicarbonate buffer (200 mM, pH 7.4) showed a rapid loss of the PGR absorption band centered at 540 nm. The initial consumption rate (Ri) gave values independent of the initial PGR concentration allowing an estimate to be made of the rate of CO3%- release of 24.6±4.3 μM min−1 for 3 μM bSOD-1. Both bSOD-1 and hSOD-1 showed a similar peroxidase activity, with enzymatic inactivation occurring over a period of 20 min. The single Trp residue (Trp32) present in hSOD-1 was rapidly consumed (initial consumption rate 1.2±0.1 μM min−1) with this occurring more rapidly than hSOD-1 inactivation, suggesting that these processes are not directly related. Added free Trp was rapidly oxidized in competition with PGR. These data indicate that PGR reacts rapidly and efficiently with CO3%- resulting from the peroxidase activity of SOD-1, and that PGR-bleaching is a simple, fast and cheap method to quantify CO3%- release from bSOD-1 and hSOD-1 peroxidase activity. |
dc.format.extent.es.fl_str_mv | 9 h. |
dc.format.mimetype.es.fl_str_mv | application/pdf |
dc.identifier.citation.es.fl_str_mv | Figueroa, J, Fuentes-Lemus, E, Dorta, E, y otros "Quantification of carbonate radical formation by the bicarbonate-dependent peroxidase activity of superoxide dismutase 1 using pyrogallol red bleaching". Redox Biology. [en línea] 2019, 24:101207. 9 h. DOI: 10.1016/j.redox.2019.101207 |
dc.identifier.doi.none.fl_str_mv | 10.1016/j.redox.2019.101207 |
dc.identifier.issn.none.fl_str_mv | 2213-2317 |
dc.identifier.uri.none.fl_str_mv | https://hdl.handle.net/20.500.12008/27231 |
dc.language.iso.none.fl_str_mv | en eng |
dc.publisher.es.fl_str_mv | Elsevier |
dc.relation.ispartof.es.fl_str_mv | Redox Biology, 2019, 24:101207 |
dc.rights.license.none.fl_str_mv | Licencia Creative Commons Atribución - No Comercial - Sin Derivadas (CC - By-NC-ND 4.0) |
dc.rights.none.fl_str_mv | info:eu-repo/semantics/openAccess |
dc.source.none.fl_str_mv | reponame:COLIBRI instname:Universidad de la República instacron:Universidad de la República |
dc.subject.es.fl_str_mv | Carbonate radical anion Superoxide dismutase Hydrogen peroxide Pyrogallol red Peroxidase activity Human SOD-1 Bovine SOD-1 EPR DMPO ABTS |
dc.title.none.fl_str_mv | Quantification of carbonate radical formation by the bicarbonate-dependent peroxidase activity of superoxide dismutase 1 using pyrogallol red bleaching |
dc.type.es.fl_str_mv | Artículo |
dc.type.none.fl_str_mv | info:eu-repo/semantics/article |
dc.type.version.none.fl_str_mv | info:eu-repo/semantics/publishedVersion |
description | Carbonate radicals (CO3%-) are generated by the bicarbonate-dependent peroxidase activity of cytosolic superoxide dismutase (Cu,Zn-SOD, SOD-1). The present work explored the use of bleaching of pyrogallol red (PGR) dye to quantify the rate of CO3%- formation from bovine and human SOD-1 (bSOD-1 and hSOD-1, respectively). This approach was compared to previously reported methods using electron paramagnetic resonance spin trapping with DMPO, and the oxidation of ABTS (2,2-azino-bis(3-ethylbenzothiazoline)-6-sulfonic acid). The kinetics of PGR consumption elicited by CO3%- was followed by visible spectrophotometry. Solutions containing PGR (5–200 μM), SOD-1 (0.3–3 μM), H2O2 (2 mM) in bicarbonate buffer (200 mM, pH 7.4) showed a rapid loss of the PGR absorption band centered at 540 nm. The initial consumption rate (Ri) gave values independent of the initial PGR concentration allowing an estimate to be made of the rate of CO3%- release of 24.6±4.3 μM min−1 for 3 μM bSOD-1. Both bSOD-1 and hSOD-1 showed a similar peroxidase activity, with enzymatic inactivation occurring over a period of 20 min. The single Trp residue (Trp32) present in hSOD-1 was rapidly consumed (initial consumption rate 1.2±0.1 μM min−1) with this occurring more rapidly than hSOD-1 inactivation, suggesting that these processes are not directly related. Added free Trp was rapidly oxidized in competition with PGR. These data indicate that PGR reacts rapidly and efficiently with CO3%- resulting from the peroxidase activity of SOD-1, and that PGR-bleaching is a simple, fast and cheap method to quantify CO3%- release from bSOD-1 and hSOD-1 peroxidase activity. |
eu_rights_str_mv | openAccess |
format | article |
id | COLIBRI_81f45beb3453e58652ccfcd1c29a1a34 |
identifier_str_mv | Figueroa, J, Fuentes-Lemus, E, Dorta, E, y otros "Quantification of carbonate radical formation by the bicarbonate-dependent peroxidase activity of superoxide dismutase 1 using pyrogallol red bleaching". Redox Biology. [en línea] 2019, 24:101207. 9 h. DOI: 10.1016/j.redox.2019.101207 2213-2317 10.1016/j.redox.2019.101207 |
instacron_str | Universidad de la República |
institution | Universidad de la República |
instname_str | Universidad de la República |
language | eng |
language_invalid_str_mv | en |
network_acronym_str | COLIBRI |
network_name_str | COLIBRI |
oai_identifier_str | oai:colibri.udelar.edu.uy:20.500.12008/27231 |
publishDate | 2019 |
reponame_str | COLIBRI |
repository.mail.fl_str_mv | mabel.seroubian@seciu.edu.uy |
repository.name.fl_str_mv | COLIBRI - Universidad de la República |
repository_id_str | 4771 |
rights_invalid_str_mv | Licencia Creative Commons Atribución - No Comercial - Sin Derivadas (CC - By-NC-ND 4.0) |
spelling | Figueroa J.D.Fuentes-Lemus E.Dorta E.Melin V.Cortés-Rios J.Faúndez M.Contretas D.Denicola Ana, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Química Biológica.Alvarez Beatriz, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Química Biológica.Davies M.J.López-Alarcón C.2021-04-23T14:44:44Z2021-04-23T14:44:44Z2019Figueroa, J, Fuentes-Lemus, E, Dorta, E, y otros "Quantification of carbonate radical formation by the bicarbonate-dependent peroxidase activity of superoxide dismutase 1 using pyrogallol red bleaching". Redox Biology. [en línea] 2019, 24:101207. 9 h. DOI: 10.1016/j.redox.2019.1012072213-2317https://hdl.handle.net/20.500.12008/2723110.1016/j.redox.2019.101207Carbonate radicals (CO3%-) are generated by the bicarbonate-dependent peroxidase activity of cytosolic superoxide dismutase (Cu,Zn-SOD, SOD-1). The present work explored the use of bleaching of pyrogallol red (PGR) dye to quantify the rate of CO3%- formation from bovine and human SOD-1 (bSOD-1 and hSOD-1, respectively). This approach was compared to previously reported methods using electron paramagnetic resonance spin trapping with DMPO, and the oxidation of ABTS (2,2-azino-bis(3-ethylbenzothiazoline)-6-sulfonic acid). The kinetics of PGR consumption elicited by CO3%- was followed by visible spectrophotometry. Solutions containing PGR (5–200 μM), SOD-1 (0.3–3 μM), H2O2 (2 mM) in bicarbonate buffer (200 mM, pH 7.4) showed a rapid loss of the PGR absorption band centered at 540 nm. The initial consumption rate (Ri) gave values independent of the initial PGR concentration allowing an estimate to be made of the rate of CO3%- release of 24.6±4.3 μM min−1 for 3 μM bSOD-1. Both bSOD-1 and hSOD-1 showed a similar peroxidase activity, with enzymatic inactivation occurring over a period of 20 min. The single Trp residue (Trp32) present in hSOD-1 was rapidly consumed (initial consumption rate 1.2±0.1 μM min−1) with this occurring more rapidly than hSOD-1 inactivation, suggesting that these processes are not directly related. Added free Trp was rapidly oxidized in competition with PGR. These data indicate that PGR reacts rapidly and efficiently with CO3%- resulting from the peroxidase activity of SOD-1, and that PGR-bleaching is a simple, fast and cheap method to quantify CO3%- release from bSOD-1 and hSOD-1 peroxidase activity.Submitted by Verdun Juan Pablo (jverdun@fcien.edu.uy) on 2021-04-22T18:26:46Z No. of bitstreams: 2 license_rdf: 23149 bytes, checksum: 1996b8461bc290aef6a27d78c67b6b52 (MD5) 10.1016j.redox.2019.101207.pdf: 989451 bytes, checksum: 72f76d629b440dbf5a280bd70c2f6010 (MD5)Approved for entry into archive by Faget Cecilia (lfaget@fcien.edu.uy) on 2021-04-23T14:38:59Z (GMT) No. of bitstreams: 2 license_rdf: 23149 bytes, checksum: 1996b8461bc290aef6a27d78c67b6b52 (MD5) 10.1016j.redox.2019.101207.pdf: 989451 bytes, checksum: 72f76d629b440dbf5a280bd70c2f6010 (MD5)Made available in DSpace by Luna Fabiana (fabiana.luna@seciu.edu.uy) on 2021-04-23T14:44:44Z (GMT). No. of bitstreams: 2 license_rdf: 23149 bytes, checksum: 1996b8461bc290aef6a27d78c67b6b52 (MD5) 10.1016j.redox.2019.101207.pdf: 989451 bytes, checksum: 72f76d629b440dbf5a280bd70c2f6010 (MD5) Previous issue date: 20199 h.application/pdfenengElsevierRedox Biology, 2019, 24:101207Las obras depositadas en el Repositorio se rigen por la Ordenanza de los Derechos de la Propiedad Intelectual de la Universidad de la República.(Res. Nº 91 de C.D.C. de 8/III/1994 – D.O. 7/IV/1994) y por la Ordenanza del Repositorio Abierto de la Universidad de la República (Res. Nº 16 de C.D.C. de 07/10/2014)info:eu-repo/semantics/openAccessLicencia Creative Commons Atribución - No Comercial - Sin Derivadas (CC - By-NC-ND 4.0)Carbonate radical anionSuperoxide dismutaseHydrogen peroxidePyrogallol redPeroxidase activityHuman SOD-1Bovine SOD-1EPRDMPOABTSQuantification of carbonate radical formation by the bicarbonate-dependent peroxidase activity of superoxide dismutase 1 using pyrogallol red bleachingArtículoinfo:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionreponame:COLIBRIinstname:Universidad de la Repúblicainstacron:Universidad de la RepúblicaFigueroa, J.D.Fuentes-Lemus, E.Dorta, E.Melin, V.Cortés-Rios, J.Faúndez, M.Contretas, D.Denicola, AnaÁlvarez, BeatrizDavies, M.J.López-Alarcón, C.LICENSElicense.txtlicense.txttext/plain; charset=utf-84267http://localhost:8080/xmlui/bitstream/20.500.12008/27231/5/license.txt6429389a7df7277b72b7924fdc7d47a9MD55CC-LICENSElicense_urllicense_urltext/plain; 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Universidadhttps://udelar.edu.uy/https://www.colibri.udelar.edu.uy/oai/requestmabel.seroubian@seciu.edu.uyUruguayopendoar:47712024-07-25T14:28:25.909445COLIBRI - Universidad de la Repúblicafalse |
spellingShingle | Quantification of carbonate radical formation by the bicarbonate-dependent peroxidase activity of superoxide dismutase 1 using pyrogallol red bleaching Figueroa, J.D. Carbonate radical anion Superoxide dismutase Hydrogen peroxide Pyrogallol red Peroxidase activity Human SOD-1 Bovine SOD-1 EPR DMPO ABTS |
status_str | publishedVersion |
title | Quantification of carbonate radical formation by the bicarbonate-dependent peroxidase activity of superoxide dismutase 1 using pyrogallol red bleaching |
title_full | Quantification of carbonate radical formation by the bicarbonate-dependent peroxidase activity of superoxide dismutase 1 using pyrogallol red bleaching |
title_fullStr | Quantification of carbonate radical formation by the bicarbonate-dependent peroxidase activity of superoxide dismutase 1 using pyrogallol red bleaching |
title_full_unstemmed | Quantification of carbonate radical formation by the bicarbonate-dependent peroxidase activity of superoxide dismutase 1 using pyrogallol red bleaching |
title_short | Quantification of carbonate radical formation by the bicarbonate-dependent peroxidase activity of superoxide dismutase 1 using pyrogallol red bleaching |
title_sort | Quantification of carbonate radical formation by the bicarbonate-dependent peroxidase activity of superoxide dismutase 1 using pyrogallol red bleaching |
topic | Carbonate radical anion Superoxide dismutase Hydrogen peroxide Pyrogallol red Peroxidase activity Human SOD-1 Bovine SOD-1 EPR DMPO ABTS |
url | https://hdl.handle.net/20.500.12008/27231 |