Quantification of carbonate radical formation by the bicarbonate-dependent peroxidase activity of superoxide dismutase 1 using pyrogallol red bleaching

Figueroa, J.D. - Fuentes-Lemus, E. - Dorta, E. - Melin, V. - Cortés-Rios, J. - Faúndez, M. - Contretas, D. - Denicola, Ana - Álvarez, Beatriz - Davies, M.J. - López-Alarcón, C.

Resumen:

Carbonate radicals (CO3%-) are generated by the bicarbonate-dependent peroxidase activity of cytosolic superoxide dismutase (Cu,Zn-SOD, SOD-1). The present work explored the use of bleaching of pyrogallol red (PGR) dye to quantify the rate of CO3%- formation from bovine and human SOD-1 (bSOD-1 and hSOD-1, respectively). This approach was compared to previously reported methods using electron paramagnetic resonance spin trapping with DMPO, and the oxidation of ABTS (2,2-azino-bis(3-ethylbenzothiazoline)-6-sulfonic acid). The kinetics of PGR consumption elicited by CO3%- was followed by visible spectrophotometry. Solutions containing PGR (5–200 μM), SOD-1 (0.3–3 μM), H2O2 (2 mM) in bicarbonate buffer (200 mM, pH 7.4) showed a rapid loss of the PGR absorption band centered at 540 nm. The initial consumption rate (Ri) gave values independent of the initial PGR concentration allowing an estimate to be made of the rate of CO3%- release of 24.6±4.3 μM min−1 for 3 μM bSOD-1. Both bSOD-1 and hSOD-1 showed a similar peroxidase activity, with enzymatic inactivation occurring over a period of 20 min. The single Trp residue (Trp32) present in hSOD-1 was rapidly consumed (initial consumption rate 1.2±0.1 μM min−1) with this occurring more rapidly than hSOD-1 inactivation, suggesting that these processes are not directly related. Added free Trp was rapidly oxidized in competition with PGR. These data indicate that PGR reacts rapidly and efficiently with CO3%- resulting from the peroxidase activity of SOD-1, and that PGR-bleaching is a simple, fast and cheap method to quantify CO3%- release from bSOD-1 and hSOD-1 peroxidase activity.


Detalles Bibliográficos
2019
Carbonate radical anion
Superoxide dismutase
Hydrogen peroxide
Pyrogallol red
Peroxidase activity
Human SOD-1
Bovine SOD-1
EPR
DMPO
ABTS
Inglés
Universidad de la República
COLIBRI
https://hdl.handle.net/20.500.12008/27231
Acceso abierto
Licencia Creative Commons Atribución - No Comercial - Sin Derivadas (CC - By-NC-ND 4.0)
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author Figueroa, J.D.
author2 Fuentes-Lemus, E.
Dorta, E.
Melin, V.
Cortés-Rios, J.
Faúndez, M.
Contretas, D.
Denicola, Ana
Álvarez, Beatriz
Davies, M.J.
López-Alarcón, C.
author2_role author
author
author
author
author
author
author
author
author
author
author_facet Figueroa, J.D.
Fuentes-Lemus, E.
Dorta, E.
Melin, V.
Cortés-Rios, J.
Faúndez, M.
Contretas, D.
Denicola, Ana
Álvarez, Beatriz
Davies, M.J.
López-Alarcón, C.
author_role author
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collection COLIBRI
dc.contributor.filiacion.none.fl_str_mv Figueroa J.D.
Fuentes-Lemus E.
Dorta E.
Melin V.
Cortés-Rios J.
Faúndez M.
Contretas D.
Denicola Ana, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Química Biológica.
Alvarez Beatriz, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Química Biológica.
Davies M.J.
López-Alarcón C.
dc.creator.none.fl_str_mv Figueroa, J.D.
Fuentes-Lemus, E.
Dorta, E.
Melin, V.
Cortés-Rios, J.
Faúndez, M.
Contretas, D.
Denicola, Ana
Álvarez, Beatriz
Davies, M.J.
López-Alarcón, C.
dc.date.accessioned.none.fl_str_mv 2021-04-23T14:44:44Z
dc.date.available.none.fl_str_mv 2021-04-23T14:44:44Z
dc.date.issued.none.fl_str_mv 2019
dc.description.abstract.none.fl_txt_mv Carbonate radicals (CO3%-) are generated by the bicarbonate-dependent peroxidase activity of cytosolic superoxide dismutase (Cu,Zn-SOD, SOD-1). The present work explored the use of bleaching of pyrogallol red (PGR) dye to quantify the rate of CO3%- formation from bovine and human SOD-1 (bSOD-1 and hSOD-1, respectively). This approach was compared to previously reported methods using electron paramagnetic resonance spin trapping with DMPO, and the oxidation of ABTS (2,2-azino-bis(3-ethylbenzothiazoline)-6-sulfonic acid). The kinetics of PGR consumption elicited by CO3%- was followed by visible spectrophotometry. Solutions containing PGR (5–200 μM), SOD-1 (0.3–3 μM), H2O2 (2 mM) in bicarbonate buffer (200 mM, pH 7.4) showed a rapid loss of the PGR absorption band centered at 540 nm. The initial consumption rate (Ri) gave values independent of the initial PGR concentration allowing an estimate to be made of the rate of CO3%- release of 24.6±4.3 μM min−1 for 3 μM bSOD-1. Both bSOD-1 and hSOD-1 showed a similar peroxidase activity, with enzymatic inactivation occurring over a period of 20 min. The single Trp residue (Trp32) present in hSOD-1 was rapidly consumed (initial consumption rate 1.2±0.1 μM min−1) with this occurring more rapidly than hSOD-1 inactivation, suggesting that these processes are not directly related. Added free Trp was rapidly oxidized in competition with PGR. These data indicate that PGR reacts rapidly and efficiently with CO3%- resulting from the peroxidase activity of SOD-1, and that PGR-bleaching is a simple, fast and cheap method to quantify CO3%- release from bSOD-1 and hSOD-1 peroxidase activity.
dc.format.extent.es.fl_str_mv 9 h.
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dc.identifier.citation.es.fl_str_mv Figueroa, J, Fuentes-Lemus, E, Dorta, E, y otros "Quantification of carbonate radical formation by the bicarbonate-dependent peroxidase activity of superoxide dismutase 1 using pyrogallol red bleaching". Redox Biology. [en línea] 2019, 24:101207. 9 h. DOI: 10.1016/j.redox.2019.101207
dc.identifier.doi.none.fl_str_mv 10.1016/j.redox.2019.101207
dc.identifier.issn.none.fl_str_mv 2213-2317
dc.identifier.uri.none.fl_str_mv https://hdl.handle.net/20.500.12008/27231
dc.language.iso.none.fl_str_mv en
eng
dc.publisher.es.fl_str_mv Elsevier
dc.relation.ispartof.es.fl_str_mv Redox Biology, 2019, 24:101207
dc.rights.license.none.fl_str_mv Licencia Creative Commons Atribución - No Comercial - Sin Derivadas (CC - By-NC-ND 4.0)
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
dc.source.none.fl_str_mv reponame:COLIBRI
instname:Universidad de la República
instacron:Universidad de la República
dc.subject.es.fl_str_mv Carbonate radical anion
Superoxide dismutase
Hydrogen peroxide
Pyrogallol red
Peroxidase activity
Human SOD-1
Bovine SOD-1
EPR
DMPO
ABTS
dc.title.none.fl_str_mv Quantification of carbonate radical formation by the bicarbonate-dependent peroxidase activity of superoxide dismutase 1 using pyrogallol red bleaching
dc.type.es.fl_str_mv Artículo
dc.type.none.fl_str_mv info:eu-repo/semantics/article
dc.type.version.none.fl_str_mv info:eu-repo/semantics/publishedVersion
description Carbonate radicals (CO3%-) are generated by the bicarbonate-dependent peroxidase activity of cytosolic superoxide dismutase (Cu,Zn-SOD, SOD-1). The present work explored the use of bleaching of pyrogallol red (PGR) dye to quantify the rate of CO3%- formation from bovine and human SOD-1 (bSOD-1 and hSOD-1, respectively). This approach was compared to previously reported methods using electron paramagnetic resonance spin trapping with DMPO, and the oxidation of ABTS (2,2-azino-bis(3-ethylbenzothiazoline)-6-sulfonic acid). The kinetics of PGR consumption elicited by CO3%- was followed by visible spectrophotometry. Solutions containing PGR (5–200 μM), SOD-1 (0.3–3 μM), H2O2 (2 mM) in bicarbonate buffer (200 mM, pH 7.4) showed a rapid loss of the PGR absorption band centered at 540 nm. The initial consumption rate (Ri) gave values independent of the initial PGR concentration allowing an estimate to be made of the rate of CO3%- release of 24.6±4.3 μM min−1 for 3 μM bSOD-1. Both bSOD-1 and hSOD-1 showed a similar peroxidase activity, with enzymatic inactivation occurring over a period of 20 min. The single Trp residue (Trp32) present in hSOD-1 was rapidly consumed (initial consumption rate 1.2±0.1 μM min−1) with this occurring more rapidly than hSOD-1 inactivation, suggesting that these processes are not directly related. Added free Trp was rapidly oxidized in competition with PGR. These data indicate that PGR reacts rapidly and efficiently with CO3%- resulting from the peroxidase activity of SOD-1, and that PGR-bleaching is a simple, fast and cheap method to quantify CO3%- release from bSOD-1 and hSOD-1 peroxidase activity.
eu_rights_str_mv openAccess
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identifier_str_mv Figueroa, J, Fuentes-Lemus, E, Dorta, E, y otros "Quantification of carbonate radical formation by the bicarbonate-dependent peroxidase activity of superoxide dismutase 1 using pyrogallol red bleaching". Redox Biology. [en línea] 2019, 24:101207. 9 h. DOI: 10.1016/j.redox.2019.101207
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repository.name.fl_str_mv COLIBRI - Universidad de la República
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rights_invalid_str_mv Licencia Creative Commons Atribución - No Comercial - Sin Derivadas (CC - By-NC-ND 4.0)
spelling Figueroa J.D.Fuentes-Lemus E.Dorta E.Melin V.Cortés-Rios J.Faúndez M.Contretas D.Denicola Ana, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Química Biológica.Alvarez Beatriz, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Química Biológica.Davies M.J.López-Alarcón C.2021-04-23T14:44:44Z2021-04-23T14:44:44Z2019Figueroa, J, Fuentes-Lemus, E, Dorta, E, y otros "Quantification of carbonate radical formation by the bicarbonate-dependent peroxidase activity of superoxide dismutase 1 using pyrogallol red bleaching". Redox Biology. [en línea] 2019, 24:101207. 9 h. DOI: 10.1016/j.redox.2019.1012072213-2317https://hdl.handle.net/20.500.12008/2723110.1016/j.redox.2019.101207Carbonate radicals (CO3%-) are generated by the bicarbonate-dependent peroxidase activity of cytosolic superoxide dismutase (Cu,Zn-SOD, SOD-1). The present work explored the use of bleaching of pyrogallol red (PGR) dye to quantify the rate of CO3%- formation from bovine and human SOD-1 (bSOD-1 and hSOD-1, respectively). This approach was compared to previously reported methods using electron paramagnetic resonance spin trapping with DMPO, and the oxidation of ABTS (2,2-azino-bis(3-ethylbenzothiazoline)-6-sulfonic acid). The kinetics of PGR consumption elicited by CO3%- was followed by visible spectrophotometry. Solutions containing PGR (5–200 μM), SOD-1 (0.3–3 μM), H2O2 (2 mM) in bicarbonate buffer (200 mM, pH 7.4) showed a rapid loss of the PGR absorption band centered at 540 nm. The initial consumption rate (Ri) gave values independent of the initial PGR concentration allowing an estimate to be made of the rate of CO3%- release of 24.6±4.3 μM min−1 for 3 μM bSOD-1. Both bSOD-1 and hSOD-1 showed a similar peroxidase activity, with enzymatic inactivation occurring over a period of 20 min. The single Trp residue (Trp32) present in hSOD-1 was rapidly consumed (initial consumption rate 1.2±0.1 μM min−1) with this occurring more rapidly than hSOD-1 inactivation, suggesting that these processes are not directly related. Added free Trp was rapidly oxidized in competition with PGR. These data indicate that PGR reacts rapidly and efficiently with CO3%- resulting from the peroxidase activity of SOD-1, and that PGR-bleaching is a simple, fast and cheap method to quantify CO3%- release from bSOD-1 and hSOD-1 peroxidase activity.Submitted by Verdun Juan Pablo (jverdun@fcien.edu.uy) on 2021-04-22T18:26:46Z No. of bitstreams: 2 license_rdf: 23149 bytes, checksum: 1996b8461bc290aef6a27d78c67b6b52 (MD5) 10.1016j.redox.2019.101207.pdf: 989451 bytes, checksum: 72f76d629b440dbf5a280bd70c2f6010 (MD5)Approved for entry into archive by Faget Cecilia (lfaget@fcien.edu.uy) on 2021-04-23T14:38:59Z (GMT) No. of bitstreams: 2 license_rdf: 23149 bytes, checksum: 1996b8461bc290aef6a27d78c67b6b52 (MD5) 10.1016j.redox.2019.101207.pdf: 989451 bytes, checksum: 72f76d629b440dbf5a280bd70c2f6010 (MD5)Made available in DSpace by Luna Fabiana (fabiana.luna@seciu.edu.uy) on 2021-04-23T14:44:44Z (GMT). No. of bitstreams: 2 license_rdf: 23149 bytes, checksum: 1996b8461bc290aef6a27d78c67b6b52 (MD5) 10.1016j.redox.2019.101207.pdf: 989451 bytes, checksum: 72f76d629b440dbf5a280bd70c2f6010 (MD5) Previous issue date: 20199 h.application/pdfenengElsevierRedox Biology, 2019, 24:101207Las obras depositadas en el Repositorio se rigen por la Ordenanza de los Derechos de la Propiedad Intelectual de la Universidad de la República.(Res. Nº 91 de C.D.C. de 8/III/1994 – D.O. 7/IV/1994) y por la Ordenanza del Repositorio Abierto de la Universidad de la República (Res. Nº 16 de C.D.C. de 07/10/2014)info:eu-repo/semantics/openAccessLicencia Creative Commons Atribución - No Comercial - Sin Derivadas (CC - By-NC-ND 4.0)Carbonate radical anionSuperoxide dismutaseHydrogen peroxidePyrogallol redPeroxidase activityHuman SOD-1Bovine SOD-1EPRDMPOABTSQuantification of carbonate radical formation by the bicarbonate-dependent peroxidase activity of superoxide dismutase 1 using pyrogallol red bleachingArtículoinfo:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionreponame:COLIBRIinstname:Universidad de la Repúblicainstacron:Universidad de la RepúblicaFigueroa, J.D.Fuentes-Lemus, E.Dorta, E.Melin, V.Cortés-Rios, J.Faúndez, M.Contretas, D.Denicola, AnaÁlvarez, BeatrizDavies, M.J.López-Alarcón, C.LICENSElicense.txtlicense.txttext/plain; charset=utf-84267http://localhost:8080/xmlui/bitstream/20.500.12008/27231/5/license.txt6429389a7df7277b72b7924fdc7d47a9MD55CC-LICENSElicense_urllicense_urltext/plain; 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Universidadhttps://udelar.edu.uy/https://www.colibri.udelar.edu.uy/oai/requestmabel.seroubian@seciu.edu.uyUruguayopendoar:47712024-07-25T14:28:25.909445COLIBRI - Universidad de la Repúblicafalse
spellingShingle Quantification of carbonate radical formation by the bicarbonate-dependent peroxidase activity of superoxide dismutase 1 using pyrogallol red bleaching
Figueroa, J.D.
Carbonate radical anion
Superoxide dismutase
Hydrogen peroxide
Pyrogallol red
Peroxidase activity
Human SOD-1
Bovine SOD-1
EPR
DMPO
ABTS
status_str publishedVersion
title Quantification of carbonate radical formation by the bicarbonate-dependent peroxidase activity of superoxide dismutase 1 using pyrogallol red bleaching
title_full Quantification of carbonate radical formation by the bicarbonate-dependent peroxidase activity of superoxide dismutase 1 using pyrogallol red bleaching
title_fullStr Quantification of carbonate radical formation by the bicarbonate-dependent peroxidase activity of superoxide dismutase 1 using pyrogallol red bleaching
title_full_unstemmed Quantification of carbonate radical formation by the bicarbonate-dependent peroxidase activity of superoxide dismutase 1 using pyrogallol red bleaching
title_short Quantification of carbonate radical formation by the bicarbonate-dependent peroxidase activity of superoxide dismutase 1 using pyrogallol red bleaching
title_sort Quantification of carbonate radical formation by the bicarbonate-dependent peroxidase activity of superoxide dismutase 1 using pyrogallol red bleaching
topic Carbonate radical anion
Superoxide dismutase
Hydrogen peroxide
Pyrogallol red
Peroxidase activity
Human SOD-1
Bovine SOD-1
EPR
DMPO
ABTS
url https://hdl.handle.net/20.500.12008/27231