Multiple introductions and onward transmission of non-pandemic HIV-1 subtype B strains in North America and Europe

Cabello, M. - Romero Brunetto, Héctor Gabriel - Bello, Gonzalo

Resumen:

Most HIV-1 subtype B infections in North America and Europe seem to have resulted from the expansion of a single pandemic lineage (B PANDEMIC) disseminated from the United States (US). Some non-pandemic subtype B strains of Caribbean origin (B CAR) may have also reached North America and Europe, but their epidemiological relevance in those regions remains largely unknown. Here we analyze a total of 20,045 HIV-1 subtype B pol sequences from the US, Canada, and Europe, to estimate the prevalence and to reconstruct the spatiotemporal dynamics of dissemination of HIV-1 B CAR strains in those regions. We find that B CAR strains were probably disseminated from the Caribbean into North America and Europe at multiple times since the early 1970s onwards. The B CAR strains reached the US, Canada and at least 16 different European countries, where they account for a very low fraction (<5%) of subtype B infections, with exception of the Czech Republic (7.7%). We also find evidence of the onward transmission of B CAR clades in the US, Canada, the Czech Republic, Germany, Italy, Spain and the UK, as well as short-distance spreading of B CAR lineages between neighboring European countries from Central and Western Europe, and long-distance dissemination between the US and Europe.


Detalles Bibliográficos
2016
Virus
HIV
Transmission of infections
Inglés
Universidad de la República
COLIBRI
https://hdl.handle.net/20.500.12008/22010
Acceso abierto
Licencia Creative Commons Atribución (CC –BY 4.0)
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author Cabello, M.
author2 Romero Brunetto, Héctor Gabriel
Bello, Gonzalo
author2_role author
author
author_facet Cabello, M.
Romero Brunetto, Héctor Gabriel
Bello, Gonzalo
author_role author
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collection COLIBRI
dc.contributor.filiacion.es.fl_str_mv Romero, Héctor. Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Biología.
dc.creator.none.fl_str_mv Cabello, M.
Romero Brunetto, Héctor Gabriel
Bello, Gonzalo
dc.date.accessioned.none.fl_str_mv 2019-10-02T22:08:25Z
dc.date.available.none.fl_str_mv 2019-10-02T22:08:25Z
dc.date.issued.es.fl_str_mv 2016
dc.date.submitted.es.fl_str_mv 20190930
dc.description.abstract.none.fl_txt_mv Most HIV-1 subtype B infections in North America and Europe seem to have resulted from the expansion of a single pandemic lineage (B PANDEMIC) disseminated from the United States (US). Some non-pandemic subtype B strains of Caribbean origin (B CAR) may have also reached North America and Europe, but their epidemiological relevance in those regions remains largely unknown. Here we analyze a total of 20,045 HIV-1 subtype B pol sequences from the US, Canada, and Europe, to estimate the prevalence and to reconstruct the spatiotemporal dynamics of dissemination of HIV-1 B CAR strains in those regions. We find that B CAR strains were probably disseminated from the Caribbean into North America and Europe at multiple times since the early 1970s onwards. The B CAR strains reached the US, Canada and at least 16 different European countries, where they account for a very low fraction (<5%) of subtype B infections, with exception of the Czech Republic (7.7%). We also find evidence of the onward transmission of B CAR clades in the US, Canada, the Czech Republic, Germany, Italy, Spain and the UK, as well as short-distance spreading of B CAR lineages between neighboring European countries from Central and Western Europe, and long-distance dissemination between the US and Europe.
dc.format.mimetype.es.fl_str_mv application/pdf
dc.identifier.citation.es.fl_str_mv Cabello, M., Romero, H., Bello, G. Multiple introductions and onward transmission of non-pandemic HIV-1 subtype B strains in North America and Europe. Scientific Reports, 2016, 6, art. nro. 33971. doi: 10.1038/srep33971
dc.identifier.doi.es.fl_str_mv 10.1038/srep33971
dc.identifier.issn.es.fl_str_mv 2045-2322
dc.identifier.uri.none.fl_str_mv https://hdl.handle.net/20.500.12008/22010
dc.language.iso.none.fl_str_mv en
eng
dc.publisher.es.fl_str_mv Nature Publishing Group
dc.relation.ispartof.es.fl_str_mv Scientific Reports, 2016, 6, art. no. 33971
dc.rights.license.none.fl_str_mv Licencia Creative Commons Atribución (CC –BY 4.0)
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
dc.source.none.fl_str_mv reponame:COLIBRI
instname:Universidad de la República
instacron:Universidad de la República
dc.subject.es.fl_str_mv Virus
dc.subject.none.fl_str_mv HIV
Transmission of infections
dc.title.none.fl_str_mv Multiple introductions and onward transmission of non-pandemic HIV-1 subtype B strains in North America and Europe
dc.type.es.fl_str_mv Artículo
dc.type.none.fl_str_mv info:eu-repo/semantics/article
dc.type.version.none.fl_str_mv info:eu-repo/semantics/publishedVersion
description Most HIV-1 subtype B infections in North America and Europe seem to have resulted from the expansion of a single pandemic lineage (B PANDEMIC) disseminated from the United States (US). Some non-pandemic subtype B strains of Caribbean origin (B CAR) may have also reached North America and Europe, but their epidemiological relevance in those regions remains largely unknown. Here we analyze a total of 20,045 HIV-1 subtype B pol sequences from the US, Canada, and Europe, to estimate the prevalence and to reconstruct the spatiotemporal dynamics of dissemination of HIV-1 B CAR strains in those regions. We find that B CAR strains were probably disseminated from the Caribbean into North America and Europe at multiple times since the early 1970s onwards. The B CAR strains reached the US, Canada and at least 16 different European countries, where they account for a very low fraction (<5%) of subtype B infections, with exception of the Czech Republic (7.7%). We also find evidence of the onward transmission of B CAR clades in the US, Canada, the Czech Republic, Germany, Italy, Spain and the UK, as well as short-distance spreading of B CAR lineages between neighboring European countries from Central and Western Europe, and long-distance dissemination between the US and Europe.
eu_rights_str_mv openAccess
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2045-2322
10.1038/srep33971
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publishDate 2016
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repository.mail.fl_str_mv mabel.seroubian@seciu.edu.uy
repository.name.fl_str_mv COLIBRI - Universidad de la República
repository_id_str 4771
rights_invalid_str_mv Licencia Creative Commons Atribución (CC –BY 4.0)
spelling Romero, Héctor. Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Biología.2019-10-02T22:08:25Z2019-10-02T22:08:25Z201620190930Cabello, M., Romero, H., Bello, G. Multiple introductions and onward transmission of non-pandemic HIV-1 subtype B strains in North America and Europe. Scientific Reports, 2016, 6, art. nro. 33971. doi: 10.1038/srep339712045-2322https://hdl.handle.net/20.500.12008/2201010.1038/srep33971Most HIV-1 subtype B infections in North America and Europe seem to have resulted from the expansion of a single pandemic lineage (B PANDEMIC) disseminated from the United States (US). Some non-pandemic subtype B strains of Caribbean origin (B CAR) may have also reached North America and Europe, but their epidemiological relevance in those regions remains largely unknown. Here we analyze a total of 20,045 HIV-1 subtype B pol sequences from the US, Canada, and Europe, to estimate the prevalence and to reconstruct the spatiotemporal dynamics of dissemination of HIV-1 B CAR strains in those regions. We find that B CAR strains were probably disseminated from the Caribbean into North America and Europe at multiple times since the early 1970s onwards. The B CAR strains reached the US, Canada and at least 16 different European countries, where they account for a very low fraction (<5%) of subtype B infections, with exception of the Czech Republic (7.7%). We also find evidence of the onward transmission of B CAR clades in the US, Canada, the Czech Republic, Germany, Italy, Spain and the UK, as well as short-distance spreading of B CAR lineages between neighboring European countries from Central and Western Europe, and long-distance dissemination between the US and Europe.Made available in DSpace on 2019-10-02T22:08:25Z (GMT). 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- Universidad de la Repúblicafalse
spellingShingle Multiple introductions and onward transmission of non-pandemic HIV-1 subtype B strains in North America and Europe
Cabello, M.
Virus
HIV
Transmission of infections
status_str publishedVersion
title Multiple introductions and onward transmission of non-pandemic HIV-1 subtype B strains in North America and Europe
title_full Multiple introductions and onward transmission of non-pandemic HIV-1 subtype B strains in North America and Europe
title_fullStr Multiple introductions and onward transmission of non-pandemic HIV-1 subtype B strains in North America and Europe
title_full_unstemmed Multiple introductions and onward transmission of non-pandemic HIV-1 subtype B strains in North America and Europe
title_short Multiple introductions and onward transmission of non-pandemic HIV-1 subtype B strains in North America and Europe
title_sort Multiple introductions and onward transmission of non-pandemic HIV-1 subtype B strains in North America and Europe
topic Virus
HIV
Transmission of infections
url https://hdl.handle.net/20.500.12008/22010