Early pest detection in soy plantations from hyperspectral measurements : A case study for caterpillar detection
Resumen:
Soybean producers suffer from caterpillar damage in many areas of the world. Estimated average economic losses are annually 500 million USD in Brazil, Argentina, Paraguay and Uruguay. Designing efficient pest control management using selective and targeted pesticide applications is extremely important both from economic and environmental perspectives. With that in mind, we conducted a research program during the 2013-2014 and 2014-2015 planting seasons in a 4,000 ha soybean farm, seeking to achieve early pest detection. Nowadays pest presence is evaluated using manual, labor-intensive counting methods based on sampling strategies which are time consuming and imprecise. The experiment was conducted as follows. Using manual counting methods as ground-truth, a spectrometer capturing reflectance from 400 to 1100 nm was used to measure the reflectance of soy plants. A first conclusion, resulting from measuring the spectral response at leaves level, showed that stress was a property of plants since different leaves with different levels of damage yielded the same spectral response. Then, to assess the applicability of unsupervised classification of plants as healthy, biotic-stressed or abiotic-stressed, feature extraction and selection from leaves spectral signatures, combined with a Supported Vector Machine classifier was designed. Optimization of SVM parameters using grid search with cross-validation, along with classification evaluation by ten-folds cross-validation showed a correct classification rate of 95,% consistently on both seasons. Controlled experiments using cages with different numbers of caterpillars--including caterpillar-free plants--were also conducted to evaluate consistency in trends of the spectral response as well as the extracted features
2015 | |
Soy plant Defoliation Point spectrometer Spectral signature UAV Multispectral camera Biotic stress Abiotic stress Support vector machine Procesamiento de Señales |
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Inglés | |
Universidad de la República | |
COLIBRI | |
https://hdl.handle.net/20.500.12008/42697 | |
Acceso abierto | |
Licencia Creative Commons Atribución - No Comercial - Sin Derivadas (CC - By-NC-ND 4.0) |
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---|---|
author | Fernández Liñares, Germán |
author2 | Fernández Liñares, Ignacio Almansa, Mónica Mastrángelo, Pedro Lema, Gabriel Fernández Flores, Germán Musé, Pablo Castiglioni, Enrique Tailanian, Matias |
author2_role | author author author author author author author author |
author_facet | Fernández Liñares, Germán Fernández Liñares, Ignacio Almansa, Mónica Mastrángelo, Pedro Lema, Gabriel Fernández Flores, Germán Musé, Pablo Castiglioni, Enrique Tailanian, Matias |
author_role | author |
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collection | COLIBRI |
dc.creator.none.fl_str_mv | Fernández Liñares, Germán Fernández Liñares, Ignacio Almansa, Mónica Mastrángelo, Pedro Lema, Gabriel Fernández Flores, Germán Musé, Pablo Castiglioni, Enrique Tailanian, Matias |
dc.date.accessioned.none.fl_str_mv | 2024-02-26T19:52:41Z |
dc.date.available.none.fl_str_mv | 2024-02-26T19:52:41Z |
dc.date.issued.es.fl_str_mv | 2015 |
dc.date.submitted.es.fl_str_mv | 20240223 |
dc.description.abstract.none.fl_txt_mv | Soybean producers suffer from caterpillar damage in many areas of the world. Estimated average economic losses are annually 500 million USD in Brazil, Argentina, Paraguay and Uruguay. Designing efficient pest control management using selective and targeted pesticide applications is extremely important both from economic and environmental perspectives. With that in mind, we conducted a research program during the 2013-2014 and 2014-2015 planting seasons in a 4,000 ha soybean farm, seeking to achieve early pest detection. Nowadays pest presence is evaluated using manual, labor-intensive counting methods based on sampling strategies which are time consuming and imprecise. The experiment was conducted as follows. Using manual counting methods as ground-truth, a spectrometer capturing reflectance from 400 to 1100 nm was used to measure the reflectance of soy plants. A first conclusion, resulting from measuring the spectral response at leaves level, showed that stress was a property of plants since different leaves with different levels of damage yielded the same spectral response. Then, to assess the applicability of unsupervised classification of plants as healthy, biotic-stressed or abiotic-stressed, feature extraction and selection from leaves spectral signatures, combined with a Supported Vector Machine classifier was designed. Optimization of SVM parameters using grid search with cross-validation, along with classification evaluation by ten-folds cross-validation showed a correct classification rate of 95,% consistently on both seasons. Controlled experiments using cages with different numbers of caterpillars--including caterpillar-free plants--were also conducted to evaluate consistency in trends of the spectral response as well as the extracted features |
dc.description.es.fl_txt_mv | Trabajo presentado en SPIE 9637, Remote Sensing for Agriculture, Ecosystems, and Hydrology XVII, 96372I (14 October 2015) |
dc.identifier.citation.es.fl_str_mv | Tailanián, M, Castiglioni, E, Musé, P, Fernández Flores, G, Lema, G, Mastrángelo, P, Almansa, M, IFernández Liñares, I, Fernández Liñares, G. "Early pest detection in soy plantations from hyperspectral measurements: a case study for caterpillar detection" Publicado en Proceedings of SPIE 9637, Remote Sensing for Agriculture, Ecosystems, and Hydrology XVII, 96372I (14 October 2015); https://doi.org/10.1117/12.2195083 |
dc.identifier.uri.none.fl_str_mv | https://hdl.handle.net/20.500.12008/42697 |
dc.language.iso.none.fl_str_mv | en eng |
dc.rights.license.none.fl_str_mv | Licencia Creative Commons Atribución - No Comercial - Sin Derivadas (CC - By-NC-ND 4.0) |
dc.rights.none.fl_str_mv | info:eu-repo/semantics/openAccess |
dc.source.none.fl_str_mv | reponame:COLIBRI instname:Universidad de la República instacron:Universidad de la República |
dc.subject.es.fl_str_mv | Soy plant Defoliation Point spectrometer Spectral signature UAV Multispectral camera Biotic stress Abiotic stress Support vector machine |
dc.subject.other.es.fl_str_mv | Procesamiento de Señales |
dc.title.none.fl_str_mv | Early pest detection in soy plantations from hyperspectral measurements : A case study for caterpillar detection |
dc.type.es.fl_str_mv | Ponencia |
dc.type.none.fl_str_mv | info:eu-repo/semantics/conferenceObject |
dc.type.version.none.fl_str_mv | info:eu-repo/semantics/publishedVersion |
description | Trabajo presentado en SPIE 9637, Remote Sensing for Agriculture, Ecosystems, and Hydrology XVII, 96372I (14 October 2015) |
eu_rights_str_mv | openAccess |
format | conferenceObject |
id | COLIBRI_68a5ef7f572407ef03ff4a92c6980a15 |
identifier_str_mv | Tailanián, M, Castiglioni, E, Musé, P, Fernández Flores, G, Lema, G, Mastrángelo, P, Almansa, M, IFernández Liñares, I, Fernández Liñares, G. "Early pest detection in soy plantations from hyperspectral measurements: a case study for caterpillar detection" Publicado en Proceedings of SPIE 9637, Remote Sensing for Agriculture, Ecosystems, and Hydrology XVII, 96372I (14 October 2015); https://doi.org/10.1117/12.2195083 |
instacron_str | Universidad de la República |
institution | Universidad de la República |
instname_str | Universidad de la República |
language | eng |
language_invalid_str_mv | en |
network_acronym_str | COLIBRI |
network_name_str | COLIBRI |
oai_identifier_str | oai:colibri.udelar.edu.uy:20.500.12008/42697 |
publishDate | 2015 |
reponame_str | COLIBRI |
repository.mail.fl_str_mv | mabel.seroubian@seciu.edu.uy |
repository.name.fl_str_mv | COLIBRI - Universidad de la República |
repository_id_str | 4771 |
rights_invalid_str_mv | Licencia Creative Commons Atribución - No Comercial - Sin Derivadas (CC - By-NC-ND 4.0) |
spelling | 2024-02-26T19:52:41Z2024-02-26T19:52:41Z201520240223Tailanián, M, Castiglioni, E, Musé, P, Fernández Flores, G, Lema, G, Mastrángelo, P, Almansa, M, IFernández Liñares, I, Fernández Liñares, G. "Early pest detection in soy plantations from hyperspectral measurements: a case study for caterpillar detection" Publicado en Proceedings of SPIE 9637, Remote Sensing for Agriculture, Ecosystems, and Hydrology XVII, 96372I (14 October 2015); https://doi.org/10.1117/12.2195083https://hdl.handle.net/20.500.12008/42697Trabajo presentado en SPIE 9637, Remote Sensing for Agriculture, Ecosystems, and Hydrology XVII, 96372I (14 October 2015)Soybean producers suffer from caterpillar damage in many areas of the world. Estimated average economic losses are annually 500 million USD in Brazil, Argentina, Paraguay and Uruguay. Designing efficient pest control management using selective and targeted pesticide applications is extremely important both from economic and environmental perspectives. With that in mind, we conducted a research program during the 2013-2014 and 2014-2015 planting seasons in a 4,000 ha soybean farm, seeking to achieve early pest detection. Nowadays pest presence is evaluated using manual, labor-intensive counting methods based on sampling strategies which are time consuming and imprecise. The experiment was conducted as follows. Using manual counting methods as ground-truth, a spectrometer capturing reflectance from 400 to 1100 nm was used to measure the reflectance of soy plants. A first conclusion, resulting from measuring the spectral response at leaves level, showed that stress was a property of plants since different leaves with different levels of damage yielded the same spectral response. Then, to assess the applicability of unsupervised classification of plants as healthy, biotic-stressed or abiotic-stressed, feature extraction and selection from leaves spectral signatures, combined with a Supported Vector Machine classifier was designed. Optimization of SVM parameters using grid search with cross-validation, along with classification evaluation by ten-folds cross-validation showed a correct classification rate of 95,% consistently on both seasons. Controlled experiments using cages with different numbers of caterpillars--including caterpillar-free plants--were also conducted to evaluate consistency in trends of the spectral response as well as the extracted featuresMade available in DSpace on 2024-02-26T19:52:41Z (GMT). No. of bitstreams: 5 TCMFLMAFF15.pdf: 587666 bytes, checksum: 48c6006f00b5759f9662273353a0e897 (MD5) license_text: 21936 bytes, checksum: 9833653f73f7853880c94a6fead477b1 (MD5) license_url: 49 bytes, checksum: 4afdbb8c545fd630ea7db775da747b2f (MD5) license_rdf: 23148 bytes, checksum: 9da0b6dfac957114c6a7714714b86306 (MD5) license.txt: 4244 bytes, checksum: 528b6a3c8c7d0c6e28129d576e989607 (MD5) Previous issue date: 2015enengLas obras depositadas en el Repositorio se rigen por la Ordenanza de los Derechos de la Propiedad Intelectual de la Universidad De La República. (Res. Nº 91 de C.D.C. de 8/III/1994 – D.O. 7/IV/1994) y por la Ordenanza del Repositorio Abierto de la Universidad de la República (Res. Nº 16 de C.D.C. de 07/10/2014)info:eu-repo/semantics/openAccessLicencia Creative Commons Atribución - No Comercial - Sin Derivadas (CC - By-NC-ND 4.0)Soy plantDefoliationPoint spectrometerSpectral signatureUAVMultispectral cameraBiotic stressAbiotic stressSupport vector machineProcesamiento de SeñalesEarly pest detection in soy plantations from hyperspectral measurements : A case study for caterpillar detectionPonenciainfo:eu-repo/semantics/conferenceObjectinfo:eu-repo/semantics/publishedVersionreponame:COLIBRIinstname:Universidad de la Repúblicainstacron:Universidad de la RepúblicaFernández Liñares, GermánFernández Liñares, IgnacioAlmansa, MónicaMastrángelo, PedroLema, GabrielFernández Flores, GermánMusé, PabloCastiglioni, EnriqueTailanian, 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- Universidad de la Repúblicafalse |
spellingShingle | Early pest detection in soy plantations from hyperspectral measurements : A case study for caterpillar detection Fernández Liñares, Germán Soy plant Defoliation Point spectrometer Spectral signature UAV Multispectral camera Biotic stress Abiotic stress Support vector machine Procesamiento de Señales |
status_str | publishedVersion |
title | Early pest detection in soy plantations from hyperspectral measurements : A case study for caterpillar detection |
title_full | Early pest detection in soy plantations from hyperspectral measurements : A case study for caterpillar detection |
title_fullStr | Early pest detection in soy plantations from hyperspectral measurements : A case study for caterpillar detection |
title_full_unstemmed | Early pest detection in soy plantations from hyperspectral measurements : A case study for caterpillar detection |
title_short | Early pest detection in soy plantations from hyperspectral measurements : A case study for caterpillar detection |
title_sort | Early pest detection in soy plantations from hyperspectral measurements : A case study for caterpillar detection |
topic | Soy plant Defoliation Point spectrometer Spectral signature UAV Multispectral camera Biotic stress Abiotic stress Support vector machine Procesamiento de Señales |
url | https://hdl.handle.net/20.500.12008/42697 |