Ribonucleic artefacts: are some extracellular RNA discoveries driven by cell culture medium components?

Tosar Rovira, Juan Pablo - Cayota, Alfonso - Eitan, E. - Halushka, M. K. - Witwer, Kenneth

Resumen:

In a recently published study, Anna Krichevsky and colleagues raise the important question ofwhether results of in vitro extracellular RNA (exRNA) studies, including extracellular vesicle (EV)investigations, are confounded by the presence of RNA in cell culture medium components suchas foetal bovine serum (FBS). The answer, according to their data, is a resounding“yes”. Even afterlengthy ultracentrifugation to remove bovine EVs from FBS, the majority of exRNA in FBSremained. Although technical factors may affect the degree of depletion, residual EVs andexRNA in FBS could influence the conclusions of in vitro studies: certainly, for secreted RNA,and possibly also for cell-associated RNA. In this commentary, we critically examine some of theliterature in this field, including a recent study from some of the authors of this piece, in light ofthe Wei et al. study and explore how cell culture-derived RNAs may affect what we think we knowabout EV RNAs. These findings hold particular consequence as the field moves towards a deeperunderstanding of EV–RNA associations and potential functions.


Detalles Bibliográficos
2017
RNA
Extracellular vesicles
Exosomes
Microvesicles
Ultracentrifugation
Serum
Cell culture
MicroRNA
Contamination
Artefact
Inglés
Universidad de la República
COLIBRI
https://hdl.handle.net/20.500.12008/22066
Acceso abierto
Licencia Creative Commons Atribución – No Comercial (CC –BY-NC 4.0)
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author Tosar Rovira, Juan Pablo
author2 Cayota, Alfonso
Eitan, E.
Halushka, M. K.
Witwer, Kenneth
author2_role author
author
author
author
author_facet Tosar Rovira, Juan Pablo
Cayota, Alfonso
Eitan, E.
Halushka, M. K.
Witwer, Kenneth
author_role author
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collection COLIBRI
dc.contributor.filiacion.es.fl_str_mv Tosar, Juan Pablo. Universidad de la República (Uruguay). Facultad de Ciencias. Centro de Investigaciones Nucleares
Cayota, Alfonso. Instituto Pasteur (Montevideo).
dc.creator.none.fl_str_mv Tosar Rovira, Juan Pablo
Cayota, Alfonso
Eitan, E.
Halushka, M. K.
Witwer, Kenneth
dc.date.accessioned.none.fl_str_mv 2019-10-02T22:12:09Z
dc.date.available.none.fl_str_mv 2019-10-02T22:12:09Z
dc.date.issued.es.fl_str_mv 2017
dc.date.submitted.es.fl_str_mv 20190930
dc.description.abstract.none.fl_txt_mv In a recently published study, Anna Krichevsky and colleagues raise the important question ofwhether results of in vitro extracellular RNA (exRNA) studies, including extracellular vesicle (EV)investigations, are confounded by the presence of RNA in cell culture medium components suchas foetal bovine serum (FBS). The answer, according to their data, is a resounding“yes”. Even afterlengthy ultracentrifugation to remove bovine EVs from FBS, the majority of exRNA in FBSremained. Although technical factors may affect the degree of depletion, residual EVs andexRNA in FBS could influence the conclusions of in vitro studies: certainly, for secreted RNA,and possibly also for cell-associated RNA. In this commentary, we critically examine some of theliterature in this field, including a recent study from some of the authors of this piece, in light ofthe Wei et al. study and explore how cell culture-derived RNAs may affect what we think we knowabout EV RNAs. These findings hold particular consequence as the field moves towards a deeperunderstanding of EV–RNA associations and potential functions.
dc.format.mimetype.es.fl_str_mv application/pdf
dc.identifier.citation.es.fl_str_mv Tosar, J.P., et al. Ribonucleic artefacts: are some extracellular RNA discoveries driven by cell culture medium components? Journal of Extracellular Vesicles, 2017, 6 (1), art. 1272832. doi: 10.1080/20013078.2016.1272832 
dc.identifier.doi.es.fl_str_mv 10.1080/20013078.2016.1272832 
dc.identifier.issn.es.fl_str_mv 2001-3078
dc.identifier.uri.none.fl_str_mv https://hdl.handle.net/20.500.12008/22066
dc.language.iso.none.fl_str_mv en
eng
dc.publisher.es.fl_str_mv Taylor
Francis
dc.relation.ispartof.es.fl_str_mv Journal of Extracellular Vesicles, 2017, 6 (1), art. 1272832
dc.rights.license.none.fl_str_mv Licencia Creative Commons Atribución – No Comercial (CC –BY-NC 4.0)
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
dc.source.none.fl_str_mv reponame:COLIBRI
instname:Universidad de la República
instacron:Universidad de la República
dc.subject.es.fl_str_mv RNA
Extracellular vesicles
Exosomes
Microvesicles
Ultracentrifugation
Serum
Cell culture
MicroRNA
Contamination
Artefact
dc.title.none.fl_str_mv Ribonucleic artefacts: are some extracellular RNA discoveries driven by cell culture medium components?
dc.type.es.fl_str_mv Artículo
dc.type.none.fl_str_mv info:eu-repo/semantics/article
dc.type.version.none.fl_str_mv info:eu-repo/semantics/publishedVersion
description In a recently published study, Anna Krichevsky and colleagues raise the important question ofwhether results of in vitro extracellular RNA (exRNA) studies, including extracellular vesicle (EV)investigations, are confounded by the presence of RNA in cell culture medium components suchas foetal bovine serum (FBS). The answer, according to their data, is a resounding“yes”. Even afterlengthy ultracentrifugation to remove bovine EVs from FBS, the majority of exRNA in FBSremained. Although technical factors may affect the degree of depletion, residual EVs andexRNA in FBS could influence the conclusions of in vitro studies: certainly, for secreted RNA,and possibly also for cell-associated RNA. In this commentary, we critically examine some of theliterature in this field, including a recent study from some of the authors of this piece, in light ofthe Wei et al. study and explore how cell culture-derived RNAs may affect what we think we knowabout EV RNAs. These findings hold particular consequence as the field moves towards a deeperunderstanding of EV–RNA associations and potential functions.
eu_rights_str_mv openAccess
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identifier_str_mv Tosar, J.P., et al. Ribonucleic artefacts: are some extracellular RNA discoveries driven by cell culture medium components? Journal of Extracellular Vesicles, 2017, 6 (1), art. 1272832. doi: 10.1080/20013078.2016.1272832 
2001-3078
10.1080/20013078.2016.1272832 
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institution Universidad de la República
instname_str Universidad de la República
language eng
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network_acronym_str COLIBRI
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publishDate 2017
reponame_str COLIBRI
repository.mail.fl_str_mv mabel.seroubian@seciu.edu.uy
repository.name.fl_str_mv COLIBRI - Universidad de la República
repository_id_str 4771
rights_invalid_str_mv Licencia Creative Commons Atribución – No Comercial (CC –BY-NC 4.0)
spelling Tosar, Juan Pablo. Universidad de la República (Uruguay). Facultad de Ciencias. Centro de Investigaciones NuclearesCayota, Alfonso. Instituto Pasteur (Montevideo).2019-10-02T22:12:09Z2019-10-02T22:12:09Z201720190930Tosar, J.P., et al. Ribonucleic artefacts: are some extracellular RNA discoveries driven by cell culture medium components? Journal of Extracellular Vesicles, 2017, 6 (1), art. 1272832. doi: 10.1080/20013078.2016.1272832 2001-3078https://hdl.handle.net/20.500.12008/2206610.1080/20013078.2016.1272832 In a recently published study, Anna Krichevsky and colleagues raise the important question ofwhether results of in vitro extracellular RNA (exRNA) studies, including extracellular vesicle (EV)investigations, are confounded by the presence of RNA in cell culture medium components suchas foetal bovine serum (FBS). The answer, according to their data, is a resounding“yes”. Even afterlengthy ultracentrifugation to remove bovine EVs from FBS, the majority of exRNA in FBSremained. Although technical factors may affect the degree of depletion, residual EVs andexRNA in FBS could influence the conclusions of in vitro studies: certainly, for secreted RNA,and possibly also for cell-associated RNA. In this commentary, we critically examine some of theliterature in this field, including a recent study from some of the authors of this piece, in light ofthe Wei et al. study and explore how cell culture-derived RNAs may affect what we think we knowabout EV RNAs. These findings hold particular consequence as the field moves towards a deeperunderstanding of EV–RNA associations and potential functions.Made available in DSpace on 2019-10-02T22:12:09Z (GMT). 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Nº 16 de C.D.C. de 07/10/2014)info:eu-repo/semantics/openAccessLicencia Creative Commons Atribución – No Comercial (CC –BY-NC 4.0)RNAExtracellular vesiclesExosomesMicrovesiclesUltracentrifugationSerumCell cultureMicroRNAContaminationArtefactRibonucleic artefacts: are some extracellular RNA discoveries driven by cell culture medium components?Artículoinfo:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionreponame:COLIBRIinstname:Universidad de la Repúblicainstacron:Universidad de la RepúblicaTosar Rovira, Juan PabloCayota, AlfonsoEitan, E.Halushka, M. 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- Universidad de la Repúblicafalse
spellingShingle Ribonucleic artefacts: are some extracellular RNA discoveries driven by cell culture medium components?
Tosar Rovira, Juan Pablo
RNA
Extracellular vesicles
Exosomes
Microvesicles
Ultracentrifugation
Serum
Cell culture
MicroRNA
Contamination
Artefact
status_str publishedVersion
title Ribonucleic artefacts: are some extracellular RNA discoveries driven by cell culture medium components?
title_full Ribonucleic artefacts: are some extracellular RNA discoveries driven by cell culture medium components?
title_fullStr Ribonucleic artefacts: are some extracellular RNA discoveries driven by cell culture medium components?
title_full_unstemmed Ribonucleic artefacts: are some extracellular RNA discoveries driven by cell culture medium components?
title_short Ribonucleic artefacts: are some extracellular RNA discoveries driven by cell culture medium components?
title_sort Ribonucleic artefacts: are some extracellular RNA discoveries driven by cell culture medium components?
topic RNA
Extracellular vesicles
Exosomes
Microvesicles
Ultracentrifugation
Serum
Cell culture
MicroRNA
Contamination
Artefact
url https://hdl.handle.net/20.500.12008/22066