An active regions approach for the segmentation of 3D biological tissue
Resumen:
Some of the most successful algorithms for the automated segmentation of images use an Active Regions approach, where a curve is evolved so as to maximize the disparity of its interior and exterior. But these techniques require the manual selection of several parameters, which make impractical the work with long image sequences or with a very dissimilar set of sequences. Unfortunately this is precisely the case with 3D biological image sequences. In this work we improve on previous Active Regions algorithms in two aspects: by introducing a way to compute and update the optimum weights for the different channels involved (color, texture, etc.) and by estimating if the moving curve has lost any object so as to launch a re-initialization step. Our method is shown to outperform previous approaches. Several examples of biological image sequences, quite long and different among themselves, are presented.
2005 | |
Biological tissues Image segmentation Biology computing PROCESAMIENTO de SEÑALES |
|
Inglés | |
Universidad de la República | |
COLIBRI | |
https://hdl.handle.net/20.500.12008/21171 | |
Acceso abierto | |
Licencia Creative Commons Atribución – No Comercial – Sin Derivadas (CC - By-NC-ND) |
_version_ | 1807522893348732928 |
---|---|
author | Cardelino, Juan |
author2 | Randall, Gregory Bertalmío, Marcelo |
author2_role | author author |
author_facet | Cardelino, Juan Randall, Gregory Bertalmío, Marcelo |
author_role | author |
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collection | COLIBRI |
dc.creator.none.fl_str_mv | Cardelino, Juan Randall, Gregory Bertalmío, Marcelo |
dc.date.accessioned.none.fl_str_mv | 2019-07-03T16:35:51Z |
dc.date.available.none.fl_str_mv | 2019-07-03T16:35:51Z |
dc.date.issued.es.fl_str_mv | 2005 |
dc.date.submitted.es.fl_str_mv | 20190703 |
dc.description.abstract.none.fl_txt_mv | Some of the most successful algorithms for the automated segmentation of images use an Active Regions approach, where a curve is evolved so as to maximize the disparity of its interior and exterior. But these techniques require the manual selection of several parameters, which make impractical the work with long image sequences or with a very dissimilar set of sequences. Unfortunately this is precisely the case with 3D biological image sequences. In this work we improve on previous Active Regions algorithms in two aspects: by introducing a way to compute and update the optimum weights for the different channels involved (color, texture, etc.) and by estimating if the moving curve has lost any object so as to launch a re-initialization step. Our method is shown to outperform previous approaches. Several examples of biological image sequences, quite long and different among themselves, are presented. |
dc.description.es.fl_txt_mv | Trabajo presentado en IEEE International Conference on Image, Genova, Italia, 2005 |
dc.identifier.citation.es.fl_str_mv | Cardelino, J, Randall, G, Bertalmío, M. An active regions approach for the segmentation of 3D biological tissue [Preprint] Publicado en Proceedings of the IEEE International Conference on Image Processing, Genova, Italia, 2005. doi 10.1109/ICIP.2005.1529741 |
dc.identifier.uri.none.fl_str_mv | https://hdl.handle.net/20.500.12008/21171 |
dc.language.iso.none.fl_str_mv | en eng |
dc.rights.license.none.fl_str_mv | Licencia Creative Commons Atribución – No Comercial – Sin Derivadas (CC - By-NC-ND) |
dc.rights.none.fl_str_mv | info:eu-repo/semantics/openAccess |
dc.source.none.fl_str_mv | reponame:COLIBRI instname:Universidad de la República instacron:Universidad de la República |
dc.subject.en.fl_str_mv | Biological tissues Image segmentation Biology computing |
dc.subject.other.es.fl_str_mv | PROCESAMIENTO de SEÑALES |
dc.title.none.fl_str_mv | An active regions approach for the segmentation of 3D biological tissue |
dc.type.en.fl_str_mv | Preprint |
dc.type.none.fl_str_mv | info:eu-repo/semantics/preprint |
dc.type.version.none.fl_str_mv | info:eu-repo/semantics/submittedVersion |
description | Trabajo presentado en IEEE International Conference on Image, Genova, Italia, 2005 |
eu_rights_str_mv | openAccess |
format | preprint |
id | COLIBRI_4ff7d94c9d4b0ccdc00a071af9ea91b3 |
identifier_str_mv | Cardelino, J, Randall, G, Bertalmío, M. An active regions approach for the segmentation of 3D biological tissue [Preprint] Publicado en Proceedings of the IEEE International Conference on Image Processing, Genova, Italia, 2005. doi 10.1109/ICIP.2005.1529741 |
instacron_str | Universidad de la República |
institution | Universidad de la República |
instname_str | Universidad de la República |
language | eng |
language_invalid_str_mv | en |
network_acronym_str | COLIBRI |
network_name_str | COLIBRI |
oai_identifier_str | oai:colibri.udelar.edu.uy:20.500.12008/21171 |
publishDate | 2005 |
reponame_str | COLIBRI |
repository.mail.fl_str_mv | mabel.seroubian@seciu.edu.uy |
repository.name.fl_str_mv | COLIBRI - Universidad de la República |
repository_id_str | 4771 |
rights_invalid_str_mv | Licencia Creative Commons Atribución – No Comercial – Sin Derivadas (CC - By-NC-ND) |
spelling | 2019-07-03T16:35:51Z2019-07-03T16:35:51Z200520190703Cardelino, J, Randall, G, Bertalmío, M. An active regions approach for the segmentation of 3D biological tissue [Preprint] Publicado en Proceedings of the IEEE International Conference on Image Processing, Genova, Italia, 2005. doi 10.1109/ICIP.2005.1529741https://hdl.handle.net/20.500.12008/21171Trabajo presentado en IEEE International Conference on Image, Genova, Italia, 2005Some of the most successful algorithms for the automated segmentation of images use an Active Regions approach, where a curve is evolved so as to maximize the disparity of its interior and exterior. But these techniques require the manual selection of several parameters, which make impractical the work with long image sequences or with a very dissimilar set of sequences. Unfortunately this is precisely the case with 3D biological image sequences. In this work we improve on previous Active Regions algorithms in two aspects: by introducing a way to compute and update the optimum weights for the different channels involved (color, texture, etc.) and by estimating if the moving curve has lost any object so as to launch a re-initialization step. Our method is shown to outperform previous approaches. Several examples of biological image sequences, quite long and different among themselves, are presented.Made available in DSpace on 2019-07-03T16:35:51Z (GMT). No. of bitstreams: 5 CRB05a.pdf: 476589 bytes, checksum: f50b48a9dbd125422dd7e291eeb8866e (MD5) license_text: 0 bytes, checksum: d41d8cd98f00b204e9800998ecf8427e (MD5) license_url: 49 bytes, checksum: 4afdbb8c545fd630ea7db775da747b2f (MD5) license_rdf: 0 bytes, checksum: d41d8cd98f00b204e9800998ecf8427e (MD5) license.txt: 4267 bytes, checksum: 6429389a7df7277b72b7924fdc7d47a9 (MD5) Previous issue date: 2005enengLas obras depositadas en el Repositorio se rigen por la Ordenanza de los Derechos de la Propiedad Intelectual de la Universidad De La República. (Res. Nº 91 de C.D.C. de 8/III/1994 – D.O. 7/IV/1994) y por la Ordenanza del Repositorio Abierto de la Universidad de la República (Res. Nº 16 de C.D.C. de 07/10/2014)info:eu-repo/semantics/openAccessLicencia Creative Commons Atribución – No Comercial – Sin Derivadas (CC - By-NC-ND)Biological tissuesImage segmentationBiology computingPROCESAMIENTO de SEÑALESAn active regions approach for the segmentation of 3D biological tissuePreprintinfo:eu-repo/semantics/preprintinfo:eu-repo/semantics/submittedVersionreponame:COLIBRIinstname:Universidad de la Repúblicainstacron:Universidad de la RepúblicaCardelino, JuanRandall, GregoryBertalmío, MarceloProcesamiento de SeñalesTratamiento de 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- Universidad de la Repúblicafalse |
spellingShingle | An active regions approach for the segmentation of 3D biological tissue Cardelino, Juan Biological tissues Image segmentation Biology computing PROCESAMIENTO de SEÑALES |
status_str | submittedVersion |
title | An active regions approach for the segmentation of 3D biological tissue |
title_full | An active regions approach for the segmentation of 3D biological tissue |
title_fullStr | An active regions approach for the segmentation of 3D biological tissue |
title_full_unstemmed | An active regions approach for the segmentation of 3D biological tissue |
title_short | An active regions approach for the segmentation of 3D biological tissue |
title_sort | An active regions approach for the segmentation of 3D biological tissue |
topic | Biological tissues Image segmentation Biology computing PROCESAMIENTO de SEÑALES |
url | https://hdl.handle.net/20.500.12008/21171 |