Characterization of extracellular vesicles and synthetic nanoparticles with four orthogonal single-particle analysis platforms
Resumen:
We compared four orthogonal technologies for sizing, counting, and phenotyping of extracellular vesicles (EVs) and synthetic particles. The platforms were: singleparticle interferometric reflectance imaging sensing (SP-IRIS) with fluorescence, nanoparticle tracking analysis (NTA) with fluorescence, microfluidic resistive pulse sensing (MRPS), and nanoflow cytometry measurement (NFCM). EVs from the human T lymphocyte line H9 (high CD81, low CD63) and the promonocytic line U937 (low CD81, high CD63) were separated from culture conditioned medium (CCM) by differential ultracentrifugation (dUC) or a combination of ultrafiltration (UF) and size exclusion chromatography (SEC) and characterized by transmission electron microscopy (TEM) and Western blot (WB). Mixtures of synthetic particles.(silica and polystyrene spheres) with known sizes and/or concentrations were also tested.MRPS andNFCMreturned similar particle counts,whileNTAdetected counts approximately one order of magnitude lower for EVs, but not for synthetic particles. SP-IRIS events could not be used to estimate particle concentrations. For sizing, SPIRIS, MRPS, and NFCM returned similar size profiles, with smaller sizes predominating (per power law distribution), but with sensitivity typically dropping off below diameters of 60 nm. NTA detected a population of particles with a mode diameter greater than 100 nm. Additionally, SP-IRIS, MRPS, and NFCM were able to identify at least three of four distinct size populations in a mixture of silica or polystyrene nanoparticles. Finally, for tetraspanin phenotyping, the SP-IRIS platform in fluorescencemode was able to detect at least twomarkers on the same particle, while NFCM detected either CD81 or CD63. Based on the results of this study, we can draw conclusions about existing single-particle analysis capabilities that may be useful for EV biomarker development and mechanistic studies.
2021 | |
Ectosomes Exosomes Extracellular vesicles Microvesicles Nanoflow cytometry Nanoparticle tracking analysis Resistive pulse sensing Single particle interferometric reflectance imaging sensing |
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Inglés | |
Universidad de la República | |
COLIBRI | |
https://hdl.handle.net/20.500.12008/33226 | |
Acceso abierto | |
Licencia Creative Commons Atribución (CC - By 4.0) |
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---|---|
author | Tosar Rovira, Juan Pablo |
author2 | Arab, Tanina Mallick, Emily R. Huang, Yiyao Dong, Liang Liao, Zhaohao |
author2_role | author author author author author |
author_facet | Tosar Rovira, Juan Pablo Arab, Tanina Mallick, Emily R. Huang, Yiyao Dong, Liang Liao, Zhaohao |
author_role | author |
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bitstream.checksumAlgorithm.fl_str_mv | MD5 MD5 MD5 MD5 MD5 |
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collection | COLIBRI |
dc.contributor.filiacion.none.fl_str_mv | Tosar Rovira Juan Pablo, Universidad de la República (Uruguay). Facultad de Ciencias. Centro de Investigaciones Nucleares. Arab Tanina Mallick Emily R. Huang Yiyao Dong Liang Liao Zhaohao |
dc.creator.none.fl_str_mv | Tosar Rovira, Juan Pablo Arab, Tanina Mallick, Emily R. Huang, Yiyao Dong, Liang Liao, Zhaohao |
dc.date.accessioned.none.fl_str_mv | 2022-08-19T13:06:57Z |
dc.date.available.none.fl_str_mv | 2022-08-19T13:06:57Z |
dc.date.issued.none.fl_str_mv | 2021 |
dc.description.abstract.none.fl_txt_mv | We compared four orthogonal technologies for sizing, counting, and phenotyping of extracellular vesicles (EVs) and synthetic particles. The platforms were: singleparticle interferometric reflectance imaging sensing (SP-IRIS) with fluorescence, nanoparticle tracking analysis (NTA) with fluorescence, microfluidic resistive pulse sensing (MRPS), and nanoflow cytometry measurement (NFCM). EVs from the human T lymphocyte line H9 (high CD81, low CD63) and the promonocytic line U937 (low CD81, high CD63) were separated from culture conditioned medium (CCM) by differential ultracentrifugation (dUC) or a combination of ultrafiltration (UF) and size exclusion chromatography (SEC) and characterized by transmission electron microscopy (TEM) and Western blot (WB). Mixtures of synthetic particles.(silica and polystyrene spheres) with known sizes and/or concentrations were also tested.MRPS andNFCMreturned similar particle counts,whileNTAdetected counts approximately one order of magnitude lower for EVs, but not for synthetic particles. SP-IRIS events could not be used to estimate particle concentrations. For sizing, SPIRIS, MRPS, and NFCM returned similar size profiles, with smaller sizes predominating (per power law distribution), but with sensitivity typically dropping off below diameters of 60 nm. NTA detected a population of particles with a mode diameter greater than 100 nm. Additionally, SP-IRIS, MRPS, and NFCM were able to identify at least three of four distinct size populations in a mixture of silica or polystyrene nanoparticles. Finally, for tetraspanin phenotyping, the SP-IRIS platform in fluorescencemode was able to detect at least twomarkers on the same particle, while NFCM detected either CD81 or CD63. Based on the results of this study, we can draw conclusions about existing single-particle analysis capabilities that may be useful for EV biomarker development and mechanistic studies. |
dc.description.es.fl_txt_mv | Ingreso parcial de los coautores. |
dc.format.extent.es.fl_str_mv | 20 h |
dc.format.mimetype.es.fl_str_mv | application/pdf |
dc.identifier.citation.es.fl_str_mv | Tosar Rovira, J, Arab, T, Mallick, E [y otros autores]. "Characterization of extracellular vesicles and synthetic nanoparticles with four orthogonal single-particle analysis platforms". Journal of Extracellular Vesicles. [en línea] 2021, 10(6): e12079. 20 h. Doi: 10.1002/jev2.12079. |
dc.identifier.doi.none.fl_str_mv | 10.1002/jev2.12079 |
dc.identifier.issn.none.fl_str_mv | 2001-3078 |
dc.identifier.uri.none.fl_str_mv | https://hdl.handle.net/20.500.12008/33226 |
dc.language.iso.none.fl_str_mv | en eng |
dc.publisher.es.fl_str_mv | International Society for Extracellular Vesicles |
dc.relation.ispartof.es.fl_str_mv | Journal of Extracellular Vesicles, 2021, 10(6): e12079. |
dc.rights.license.none.fl_str_mv | Licencia Creative Commons Atribución (CC - By 4.0) |
dc.rights.none.fl_str_mv | info:eu-repo/semantics/openAccess |
dc.source.none.fl_str_mv | reponame:COLIBRI instname:Universidad de la República instacron:Universidad de la República |
dc.subject.es.fl_str_mv | Ectosomes Exosomes Extracellular vesicles Microvesicles Nanoflow cytometry Nanoparticle tracking analysis Resistive pulse sensing Single particle interferometric reflectance imaging sensing |
dc.title.none.fl_str_mv | Characterization of extracellular vesicles and synthetic nanoparticles with four orthogonal single-particle analysis platforms |
dc.type.es.fl_str_mv | Artículo |
dc.type.none.fl_str_mv | info:eu-repo/semantics/article |
dc.type.version.none.fl_str_mv | info:eu-repo/semantics/publishedVersion |
description | Ingreso parcial de los coautores. |
eu_rights_str_mv | openAccess |
format | article |
id | COLIBRI_484d7486bf630acbf5ec7e24ec5b14cc |
identifier_str_mv | Tosar Rovira, J, Arab, T, Mallick, E [y otros autores]. "Characterization of extracellular vesicles and synthetic nanoparticles with four orthogonal single-particle analysis platforms". Journal of Extracellular Vesicles. [en línea] 2021, 10(6): e12079. 20 h. Doi: 10.1002/jev2.12079. 2001-3078 10.1002/jev2.12079 |
instacron_str | Universidad de la República |
institution | Universidad de la República |
instname_str | Universidad de la República |
language | eng |
language_invalid_str_mv | en |
network_acronym_str | COLIBRI |
network_name_str | COLIBRI |
oai_identifier_str | oai:colibri.udelar.edu.uy:20.500.12008/33226 |
publishDate | 2021 |
reponame_str | COLIBRI |
repository.mail.fl_str_mv | mabel.seroubian@seciu.edu.uy |
repository.name.fl_str_mv | COLIBRI - Universidad de la República |
repository_id_str | 4771 |
rights_invalid_str_mv | Licencia Creative Commons Atribución (CC - By 4.0) |
spelling | Tosar Rovira Juan Pablo, Universidad de la República (Uruguay). Facultad de Ciencias. Centro de Investigaciones Nucleares.Arab TaninaMallick Emily R.Huang YiyaoDong LiangLiao Zhaohao2022-08-19T13:06:57Z2022-08-19T13:06:57Z2021Tosar Rovira, J, Arab, T, Mallick, E [y otros autores]. "Characterization of extracellular vesicles and synthetic nanoparticles with four orthogonal single-particle analysis platforms". Journal of Extracellular Vesicles. [en línea] 2021, 10(6): e12079. 20 h. Doi: 10.1002/jev2.12079.2001-3078https://hdl.handle.net/20.500.12008/3322610.1002/jev2.12079Ingreso parcial de los coautores.We compared four orthogonal technologies for sizing, counting, and phenotyping of extracellular vesicles (EVs) and synthetic particles. The platforms were: singleparticle interferometric reflectance imaging sensing (SP-IRIS) with fluorescence, nanoparticle tracking analysis (NTA) with fluorescence, microfluidic resistive pulse sensing (MRPS), and nanoflow cytometry measurement (NFCM). EVs from the human T lymphocyte line H9 (high CD81, low CD63) and the promonocytic line U937 (low CD81, high CD63) were separated from culture conditioned medium (CCM) by differential ultracentrifugation (dUC) or a combination of ultrafiltration (UF) and size exclusion chromatography (SEC) and characterized by transmission electron microscopy (TEM) and Western blot (WB). Mixtures of synthetic particles.(silica and polystyrene spheres) with known sizes and/or concentrations were also tested.MRPS andNFCMreturned similar particle counts,whileNTAdetected counts approximately one order of magnitude lower for EVs, but not for synthetic particles. SP-IRIS events could not be used to estimate particle concentrations. For sizing, SPIRIS, MRPS, and NFCM returned similar size profiles, with smaller sizes predominating (per power law distribution), but with sensitivity typically dropping off below diameters of 60 nm. NTA detected a population of particles with a mode diameter greater than 100 nm. Additionally, SP-IRIS, MRPS, and NFCM were able to identify at least three of four distinct size populations in a mixture of silica or polystyrene nanoparticles. Finally, for tetraspanin phenotyping, the SP-IRIS platform in fluorescencemode was able to detect at least twomarkers on the same particle, while NFCM detected either CD81 or CD63. Based on the results of this study, we can draw conclusions about existing single-particle analysis capabilities that may be useful for EV biomarker development and mechanistic studies.Submitted by Parodi Mónica (mparodi@fcien.edu.uy) on 2022-07-27T15:29:00Z No. of bitstreams: 2 license_rdf: 19875 bytes, checksum: 9fdbed07f52437945402c4e70fa4773e (MD5) 101002jev212079.pdf: 4749539 bytes, checksum: 1989d0ab003af64bd56d8d4a03811ac8 (MD5)Approved for entry into archive by Faget Cecilia (lfaget@fcien.edu.uy) on 2022-08-19T11:50:24Z (GMT) No. of bitstreams: 2 license_rdf: 19875 bytes, checksum: 9fdbed07f52437945402c4e70fa4773e (MD5) 101002jev212079.pdf: 4749539 bytes, checksum: 1989d0ab003af64bd56d8d4a03811ac8 (MD5)Made available in DSpace by Luna Fabiana (fabiana.luna@seciu.edu.uy) on 2022-08-19T13:06:57Z (GMT). No. of bitstreams: 2 license_rdf: 19875 bytes, checksum: 9fdbed07f52437945402c4e70fa4773e (MD5) 101002jev212079.pdf: 4749539 bytes, checksum: 1989d0ab003af64bd56d8d4a03811ac8 (MD5) Previous issue date: 202120 happlication/pdfenengInternational Society for Extracellular VesiclesJournal of Extracellular Vesicles, 2021, 10(6): e12079.Las obras depositadas en el Repositorio se rigen por la Ordenanza de los Derechos de la Propiedad Intelectual de la Universidad de la República.(Res. Nº 91 de C.D.C. de 8/III/1994 – D.O. 7/IV/1994) y por la Ordenanza del Repositorio Abierto de la Universidad de la República (Res. Nº 16 de C.D.C. de 07/10/2014)info:eu-repo/semantics/openAccessLicencia Creative Commons Atribución (CC - By 4.0)EctosomesExosomesExtracellular vesiclesMicrovesiclesNanoflow cytometryNanoparticle tracking analysisResistive pulse sensingSingle particle interferometric reflectance imaging sensingCharacterization of extracellular vesicles and synthetic nanoparticles with four orthogonal single-particle analysis platformsArtículoinfo:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionreponame:COLIBRIinstname:Universidad de la Repúblicainstacron:Universidad de la RepúblicaTosar Rovira, Juan PabloArab, TaninaMallick, Emily R.Huang, YiyaoDong, LiangLiao, ZhaohaoLICENSElicense.txtlicense.txttext/plain; charset=utf-84267http://localhost:8080/xmlui/bitstream/20.500.12008/33226/5/license.txt6429389a7df7277b72b7924fdc7d47a9MD55CC-LICENSElicense_urllicense_urltext/plain; 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- Universidad de la Repúblicafalse |
spellingShingle | Characterization of extracellular vesicles and synthetic nanoparticles with four orthogonal single-particle analysis platforms Tosar Rovira, Juan Pablo Ectosomes Exosomes Extracellular vesicles Microvesicles Nanoflow cytometry Nanoparticle tracking analysis Resistive pulse sensing Single particle interferometric reflectance imaging sensing |
status_str | publishedVersion |
title | Characterization of extracellular vesicles and synthetic nanoparticles with four orthogonal single-particle analysis platforms |
title_full | Characterization of extracellular vesicles and synthetic nanoparticles with four orthogonal single-particle analysis platforms |
title_fullStr | Characterization of extracellular vesicles and synthetic nanoparticles with four orthogonal single-particle analysis platforms |
title_full_unstemmed | Characterization of extracellular vesicles and synthetic nanoparticles with four orthogonal single-particle analysis platforms |
title_short | Characterization of extracellular vesicles and synthetic nanoparticles with four orthogonal single-particle analysis platforms |
title_sort | Characterization of extracellular vesicles and synthetic nanoparticles with four orthogonal single-particle analysis platforms |
topic | Ectosomes Exosomes Extracellular vesicles Microvesicles Nanoflow cytometry Nanoparticle tracking analysis Resistive pulse sensing Single particle interferometric reflectance imaging sensing |
url | https://hdl.handle.net/20.500.12008/33226 |