Unexpected high yield of acrolein underlies the importance of the hydrogen-abstraction mechanism in photooxidation of allyl methyl sulfide (AMS)
Resumen:
This work explores theoretically the gas phase oxidation of allyl methyl sulfide (AMS, H2C CHCH2SCH3) initiated by •OH radicals, focusing on the H-abstraction pathway at the M06-2X-D3/aug-cc-pVTZ and MN15/augcc- pVTZ levels of theory (m06Tz and mn15Tz). The formation of a prereactive complex (PRC) is involved in H-abstraction processes with two potential directions of approach for the OH radical, denoted as “α” and “β”. The PRCs, demonstrate increased reactivity, primarily due to the interaction between the sulfur atoms and the hydroxyl hydrogen. A scheme for the H-abstraction mechanism that supports the experimentally identified products and predicts the formation of some S-containing low volatility products is proposed. The comparison of the potential energy surface (PES) between the double bond addition and H-abstraction paths in the AMS molecule shows that at the m06Tz level of theory, the H-abstraction on C3 and the addition to C1 have nearly the same profile of energy, while at the mn15Tz level, the minimum energy channel is the addition to C1. The theoretical rate coefficient for each reaction channel was calculated, considering the formation of a PRC prior to reaching the transition state of each channel and assuming thermal equilibrium between reactants and the PRC. The rate constants were calculated in a multi-TS/multi-conformer way at the SVECV-f12/m06Tz and SVECV-f12/mn15Tz levels of theory. The SVECV-f12 method is consistent in its predictions in both systems and exhibits only minor deviations from the experimental rate constants. Despite some specific differences due to the DFT method supporting the SVECV-f12 calculations, both methodologies predict a significant Habstraction contribution in the AMS + OH gas phase reaction, which explains the high formation yield for acrolein determined experimentally.
| 2024 | |
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Unsaturated sulfur compound H-abstraction Prereactive complex Theoretical rate constant Addition-abstraction branching ratio Compuesto de azufre insaturado Abstracción H Complejo prereactivo Constante de velocidad teórica Relación de ramificación adición-abstracción |
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| Inglés | |
| Universidad de la República | |
| COLIBRI | |
| https://hdl.handle.net/20.500.12008/49975 | |
| Acceso abierto | |
| Licencia Creative Commons Atribución - No Comercial - Sin Derivadas (CC - By-NC-ND 4.0) |
| _version_ | 1875693328597516288 |
|---|---|
| author | Cardona, Alejandro L. |
| author2 | Teruel, Mariano A. Ventura, Oscar N. |
| author2_role | author author |
| author_facet | Cardona, Alejandro L. Teruel, Mariano A. Ventura, Oscar N. |
| author_role | author |
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| collection | COLIBRI |
| dc.contributor.filiacion.none.fl_str_mv | Cardona Alejandro L., Universidad de la República (Uruguay). Facultad de Química. DETEMA. Computational Chemistry and Biology Group (CCBG) Teruel Mariano A., Universidad Nacional de Córdoba (Argentina). Facultad de Ciencias Químicas. Departamento de Fisicoquímica. CONICET. Instituto de Investigaciones en Fisicoquímica de Córdoba (I.N.F.I.Q.C.). Laboratorio Universitario de Química y Contaminación del Aire (L. U. Q. C. A.). Ventura Oscar N., Universidad de la República (Uruguay). Facultad de Química. DETEMA. Computational Chemistry and Biology Group (CCBG) |
| dc.creator.none.fl_str_mv | Cardona, Alejandro L. Teruel, Mariano A. Ventura, Oscar N. |
| dc.date.accessioned.none.fl_str_mv | 2025-05-09T18:26:31Z |
| dc.date.available.none.fl_str_mv | 2025-05-09T18:26:31Z |
| dc.date.issued.none.fl_str_mv | 2024 |
| dc.description.abstract.none.fl_txt_mv | This work explores theoretically the gas phase oxidation of allyl methyl sulfide (AMS, H2C CHCH2SCH3) initiated by •OH radicals, focusing on the H-abstraction pathway at the M06-2X-D3/aug-cc-pVTZ and MN15/augcc- pVTZ levels of theory (m06Tz and mn15Tz). The formation of a prereactive complex (PRC) is involved in H-abstraction processes with two potential directions of approach for the OH radical, denoted as “α” and “β”. The PRCs, demonstrate increased reactivity, primarily due to the interaction between the sulfur atoms and the hydroxyl hydrogen. A scheme for the H-abstraction mechanism that supports the experimentally identified products and predicts the formation of some S-containing low volatility products is proposed. The comparison of the potential energy surface (PES) between the double bond addition and H-abstraction paths in the AMS molecule shows that at the m06Tz level of theory, the H-abstraction on C3 and the addition to C1 have nearly the same profile of energy, while at the mn15Tz level, the minimum energy channel is the addition to C1. The theoretical rate coefficient for each reaction channel was calculated, considering the formation of a PRC prior to reaching the transition state of each channel and assuming thermal equilibrium between reactants and the PRC. The rate constants were calculated in a multi-TS/multi-conformer way at the SVECV-f12/m06Tz and SVECV-f12/mn15Tz levels of theory. The SVECV-f12 method is consistent in its predictions in both systems and exhibits only minor deviations from the experimental rate constants. Despite some specific differences due to the DFT method supporting the SVECV-f12 calculations, both methodologies predict a significant Habstraction contribution in the AMS + OH gas phase reaction, which explains the high formation yield for acrolein determined experimentally. |
| dc.description.es.fl_txt_mv | Postprint |
| dc.format.extent.es.fl_str_mv | 11 p. |
| dc.format.mimetype.es.fl_str_mv | application/pdf |
| dc.identifier.citation.es.fl_str_mv | Cardona, A., Teruel, M. y Ventura, O. "Unexpected high yield of acrolein underlies the importance of the hydrogen-abstraction mechanism in photooxidation of allyl methyl sulfide (AMS)" Chemosphere [en línea] v.354, 2024. 11 p. DOI: 10.1016/j.chemosphere.2024.141693 |
| dc.identifier.doi.none.fl_str_mv | 10.1016/j.chemosphere.2024.141693 |
| dc.identifier.uri.none.fl_str_mv | https://hdl.handle.net/20.500.12008/49975 |
| dc.language.iso.none.fl_str_mv | en eng |
| dc.publisher.es.fl_str_mv | Elsevier |
| dc.relation.none.fl_str_mv | PDF Chemosphere, v.354, 2024 |
| dc.rights.license.none.fl_str_mv | Licencia Creative Commons Atribución - No Comercial - Sin Derivadas (CC - By-NC-ND 4.0) |
| dc.rights.none.fl_str_mv | info:eu-repo/semantics/openAccess |
| dc.source.none.fl_str_mv | reponame:COLIBRI instname:Universidad de la República instacron:Universidad de la República |
| dc.subject.es.fl_str_mv | Unsaturated sulfur compound H-abstraction Prereactive complex Theoretical rate constant Addition-abstraction branching ratio Compuesto de azufre insaturado Abstracción H Complejo prereactivo Constante de velocidad teórica Relación de ramificación adición-abstracción |
| dc.title.none.fl_str_mv | Unexpected high yield of acrolein underlies the importance of the hydrogen-abstraction mechanism in photooxidation of allyl methyl sulfide (AMS) |
| dc.type.es.fl_str_mv | Artículo |
| dc.type.none.fl_str_mv | info:eu-repo/semantics/article |
| dc.type.version.none.fl_str_mv | info:eu-repo/semantics/publishedVersion |
| description | Postprint |
| eu_rights_str_mv | openAccess |
| format | article |
| id | COLIBRI_3b4cba17620556b103e579fb92cdb891 |
| identifier_str_mv | Cardona, A., Teruel, M. y Ventura, O. "Unexpected high yield of acrolein underlies the importance of the hydrogen-abstraction mechanism in photooxidation of allyl methyl sulfide (AMS)" Chemosphere [en línea] v.354, 2024. 11 p. DOI: 10.1016/j.chemosphere.2024.141693 10.1016/j.chemosphere.2024.141693 |
| instacron_str | Universidad de la República |
| institution | Universidad de la República |
| instname_str | Universidad de la República |
| language | eng |
| language_invalid_str_mv | en |
| network_acronym_str | COLIBRI |
| network_name_str | COLIBRI |
| oai_identifier_str | oai:colibri.udelar.edu.uy:20.500.12008/49975 |
| publishDate | 2024 |
| reponame_str | COLIBRI |
| repository.mail.fl_str_mv | karina.camps@seciu.edu.uy |
| repository.name.fl_str_mv | COLIBRI - Universidad de la República |
| repository_id_str | 4771 |
| rights_invalid_str_mv | Licencia Creative Commons Atribución - No Comercial - Sin Derivadas (CC - By-NC-ND 4.0) |
| spelling | Cardona Alejandro L., Universidad de la República (Uruguay). Facultad de Química. DETEMA. Computational Chemistry and Biology Group (CCBG)Teruel Mariano A., Universidad Nacional de Córdoba (Argentina). Facultad de Ciencias Químicas. Departamento de Fisicoquímica. CONICET. Instituto de Investigaciones en Fisicoquímica de Córdoba (I.N.F.I.Q.C.). Laboratorio Universitario de Química y Contaminación del Aire (L. U. Q. C. A.).Ventura Oscar N., Universidad de la República (Uruguay). Facultad de Química. DETEMA. Computational Chemistry and Biology Group (CCBG)2025-05-09T18:26:31Z2025-05-09T18:26:31Z2024Cardona, A., Teruel, M. y Ventura, O. "Unexpected high yield of acrolein underlies the importance of the hydrogen-abstraction mechanism in photooxidation of allyl methyl sulfide (AMS)" Chemosphere [en línea] v.354, 2024. 11 p. DOI: 10.1016/j.chemosphere.2024.141693https://hdl.handle.net/20.500.12008/4997510.1016/j.chemosphere.2024.141693PostprintThis work explores theoretically the gas phase oxidation of allyl methyl sulfide (AMS, H2C CHCH2SCH3) initiated by •OH radicals, focusing on the H-abstraction pathway at the M06-2X-D3/aug-cc-pVTZ and MN15/augcc- pVTZ levels of theory (m06Tz and mn15Tz). The formation of a prereactive complex (PRC) is involved in H-abstraction processes with two potential directions of approach for the OH radical, denoted as “α” and “β”. The PRCs, demonstrate increased reactivity, primarily due to the interaction between the sulfur atoms and the hydroxyl hydrogen. A scheme for the H-abstraction mechanism that supports the experimentally identified products and predicts the formation of some S-containing low volatility products is proposed. The comparison of the potential energy surface (PES) between the double bond addition and H-abstraction paths in the AMS molecule shows that at the m06Tz level of theory, the H-abstraction on C3 and the addition to C1 have nearly the same profile of energy, while at the mn15Tz level, the minimum energy channel is the addition to C1. The theoretical rate coefficient for each reaction channel was calculated, considering the formation of a PRC prior to reaching the transition state of each channel and assuming thermal equilibrium between reactants and the PRC. The rate constants were calculated in a multi-TS/multi-conformer way at the SVECV-f12/m06Tz and SVECV-f12/mn15Tz levels of theory. The SVECV-f12 method is consistent in its predictions in both systems and exhibits only minor deviations from the experimental rate constants. Despite some specific differences due to the DFT method supporting the SVECV-f12 calculations, both methodologies predict a significant Habstraction contribution in the AMS + OH gas phase reaction, which explains the high formation yield for acrolein determined experimentally.Submitted by Suhr Deborah (dsuhr@fq.edu.uy) on 2025-05-08T15:44:05Z No. of bitstreams: 2 license_rdf: 26539 bytes, checksum: 3b50ae24bd8bd076d49a70878a8a2d2c (MD5) Unexpected high yield of acrolein.pdf: 1271552 bytes, checksum: eb938c57a93f638f78865c904fa576a7 (MD5)Made available in DSpace by Luna Fabiana (fabiana.luna@seciu.edu.uy) on 2025-05-09T18:26:31Z (GMT). No. of bitstreams: 2 license_rdf: 26539 bytes, checksum: 3b50ae24bd8bd076d49a70878a8a2d2c (MD5) Unexpected high yield of acrolein.pdf: 1271552 bytes, checksum: eb938c57a93f638f78865c904fa576a7 (MD5) Previous issue date: 202411 p.application/pdfenengElsevierPDFChemosphere, v.354, 2024Las obras depositadas en el Repositorio se rigen por la Ordenanza de los Derechos de la Propiedad Intelectual de la Universidad de la República.(Res. Nº 91 de C.D.C. de 8/III/1994 – D.O. 7/IV/1994) y por la Ordenanza del Repositorio Abierto de la Universidad de la República (Res. Nº 16 de C.D.C. de 07/10/2014)info:eu-repo/semantics/openAccessLicencia Creative Commons Atribución - No Comercial - Sin Derivadas (CC - By-NC-ND 4.0)Unsaturated sulfur compoundH-abstractionPrereactive complexTheoretical rate constantAddition-abstraction branching ratioCompuesto de azufre insaturadoAbstracción HComplejo prereactivoConstante de velocidad teóricaRelación de ramificación adición-abstracciónUnexpected high yield of acrolein underlies the importance of the hydrogen-abstraction mechanism in photooxidation of allyl methyl sulfide (AMS)Artículoinfo:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionreponame:COLIBRIinstname:Universidad de la Repúblicainstacron:Universidad de la RepúblicaCardona, Alejandro L.Teruel, Mariano A.Ventura, Oscar N.LICENSElicense.txtlicense.txttext/plain; charset=utf-84267http://localhost:8080/xmlui/bitstream/20.500.12008/49975/5/license.txt6429389a7df7277b72b7924fdc7d47a9MD55CC-LICENSElicense_urllicense_urltext/plain; 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- Universidad de la Repúblicafalse |
| spellingShingle | Unexpected high yield of acrolein underlies the importance of the hydrogen-abstraction mechanism in photooxidation of allyl methyl sulfide (AMS) Cardona, Alejandro L. Unsaturated sulfur compound H-abstraction Prereactive complex Theoretical rate constant Addition-abstraction branching ratio Compuesto de azufre insaturado Abstracción H Complejo prereactivo Constante de velocidad teórica Relación de ramificación adición-abstracción |
| status_str | publishedVersion |
| title | Unexpected high yield of acrolein underlies the importance of the hydrogen-abstraction mechanism in photooxidation of allyl methyl sulfide (AMS) |
| title_full | Unexpected high yield of acrolein underlies the importance of the hydrogen-abstraction mechanism in photooxidation of allyl methyl sulfide (AMS) |
| title_fullStr | Unexpected high yield of acrolein underlies the importance of the hydrogen-abstraction mechanism in photooxidation of allyl methyl sulfide (AMS) |
| title_full_unstemmed | Unexpected high yield of acrolein underlies the importance of the hydrogen-abstraction mechanism in photooxidation of allyl methyl sulfide (AMS) |
| title_short | Unexpected high yield of acrolein underlies the importance of the hydrogen-abstraction mechanism in photooxidation of allyl methyl sulfide (AMS) |
| title_sort | Unexpected high yield of acrolein underlies the importance of the hydrogen-abstraction mechanism in photooxidation of allyl methyl sulfide (AMS) |
| topic | Unsaturated sulfur compound H-abstraction Prereactive complex Theoretical rate constant Addition-abstraction branching ratio Compuesto de azufre insaturado Abstracción H Complejo prereactivo Constante de velocidad teórica Relación de ramificación adición-abstracción |
| url | https://hdl.handle.net/20.500.12008/49975 |