Nucleotide sequence and results of test of adaptive evolution in the α-globin gene of octodontoid rodents
Resumen:
The data presented in this article are related to the research article entitled “Molecular adaptive convergence in the α-globin gene in subterranean octodontid rodents” (Tomasco et al., 2017) [1]. This article shows the nucleotide sequences of α-globin subunit gene of hemoglobin of several South American caviomorph rodents, including subterranean and fossorial species. These sequences are deposited in Genbank, with accession numbers ranging from MF169881 to MF169898. Of a total of 429 nucleotides analyzed (143 codons), 100 variable sites and 43 amino acid replacements were reported. In this article we also show the results of TreeSaap (Woolley et al., 2003) [2] and MEME (Murrell et al., 2012) [3], that identified some replacement changes as interesting for future studies of adaptive evolution in this large rodent radiation.
| 2017 | |
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Biology Molecular evolution |
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| Inglés | |
| Universidad de la República | |
| COLIBRI | |
| https://hdl.handle.net/20.500.12008/35759 | |
| Acceso abierto | |
| Licencia Creative Commons Atribución (CC - By 4.0) |
| _version_ | 1807522795027955712 |
|---|---|
| author | Tomasco Introini, Ivanna Haydée |
| author2 | Boullosa, Nicolás Hoffmann, F.G. Lessa Gallinal, Enrique Pablo |
| author2_role | author author author |
| author_facet | Tomasco Introini, Ivanna Haydée Boullosa, Nicolás Hoffmann, F.G. Lessa Gallinal, Enrique Pablo |
| author_role | author |
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| collection | COLIBRI |
| dc.contributor.filiacion.none.fl_str_mv | Tomasco Introini Ivanna Haydée, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Biología. Boullosa Nicolás, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Biología. Hoffmann F.G. Lessa Gallinal Enrique Pablo, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Biología. |
| dc.creator.none.fl_str_mv | Tomasco Introini, Ivanna Haydée Boullosa, Nicolás Hoffmann, F.G. Lessa Gallinal, Enrique Pablo |
| dc.date.accessioned.none.fl_str_mv | 2023-02-08T14:40:14Z |
| dc.date.available.none.fl_str_mv | 2023-02-08T14:40:14Z |
| dc.date.issued.none.fl_str_mv | 2017 |
| dc.description.abstract.none.fl_txt_mv | The data presented in this article are related to the research article entitled “Molecular adaptive convergence in the α-globin gene in subterranean octodontid rodents” (Tomasco et al., 2017) [1]. This article shows the nucleotide sequences of α-globin subunit gene of hemoglobin of several South American caviomorph rodents, including subterranean and fossorial species. These sequences are deposited in Genbank, with accession numbers ranging from MF169881 to MF169898. Of a total of 429 nucleotides analyzed (143 codons), 100 variable sites and 43 amino acid replacements were reported. In this article we also show the results of TreeSaap (Woolley et al., 2003) [2] and MEME (Murrell et al., 2012) [3], that identified some replacement changes as interesting for future studies of adaptive evolution in this large rodent radiation. |
| dc.format.extent.es.fl_str_mv | 7 h. |
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| dc.identifier.citation.es.fl_str_mv | Tomasco Introini, I, Boullosa, N, Hoffmann, F [y otros autores]. "Nucleotide sequence and results of test of adaptive evolution in the α-globin gene of octodontoid rodents". Data in Briel. [en línea] 2017, 15: 517-521. 7 h. DOI: 10.1016/j.dib.2017.09.017. |
| dc.identifier.doi.none.fl_str_mv | 10.1016/j.dib.2017.09.017. |
| dc.identifier.issn.none.fl_str_mv | 2352-3409 |
| dc.identifier.uri.none.fl_str_mv | https://hdl.handle.net/20.500.12008/35759 |
| dc.language.iso.none.fl_str_mv | en_US eng |
| dc.publisher.es.fl_str_mv | Elsevier |
| dc.relation.ispartof.es.fl_str_mv | Data in Briel, 2017, 15: 517-521. |
| dc.rights.license.none.fl_str_mv | Licencia Creative Commons Atribución (CC - By 4.0) |
| dc.rights.none.fl_str_mv | info:eu-repo/semantics/openAccess |
| dc.source.none.fl_str_mv | reponame:COLIBRI instname:Universidad de la República instacron:Universidad de la República |
| dc.subject.es.fl_str_mv | Biology Molecular evolution |
| dc.title.none.fl_str_mv | Nucleotide sequence and results of test of adaptive evolution in the α-globin gene of octodontoid rodents |
| dc.type.es.fl_str_mv | Artículo |
| dc.type.none.fl_str_mv | info:eu-repo/semantics/article |
| dc.type.version.none.fl_str_mv | info:eu-repo/semantics/publishedVersion |
| description | The data presented in this article are related to the research article entitled “Molecular adaptive convergence in the α-globin gene in subterranean octodontid rodents” (Tomasco et al., 2017) [1]. This article shows the nucleotide sequences of α-globin subunit gene of hemoglobin of several South American caviomorph rodents, including subterranean and fossorial species. These sequences are deposited in Genbank, with accession numbers ranging from MF169881 to MF169898. Of a total of 429 nucleotides analyzed (143 codons), 100 variable sites and 43 amino acid replacements were reported. In this article we also show the results of TreeSaap (Woolley et al., 2003) [2] and MEME (Murrell et al., 2012) [3], that identified some replacement changes as interesting for future studies of adaptive evolution in this large rodent radiation. |
| eu_rights_str_mv | openAccess |
| format | article |
| id | COLIBRI_1793c3acbaefa808d74e915951e31b97 |
| identifier_str_mv | Tomasco Introini, I, Boullosa, N, Hoffmann, F [y otros autores]. "Nucleotide sequence and results of test of adaptive evolution in the α-globin gene of octodontoid rodents". Data in Briel. [en línea] 2017, 15: 517-521. 7 h. DOI: 10.1016/j.dib.2017.09.017. 2352-3409 10.1016/j.dib.2017.09.017. |
| instacron_str | Universidad de la República |
| institution | Universidad de la República |
| instname_str | Universidad de la República |
| language | eng |
| language_invalid_str_mv | en_US |
| network_acronym_str | COLIBRI |
| network_name_str | COLIBRI |
| oai_identifier_str | oai:colibri.udelar.edu.uy:20.500.12008/35759 |
| publishDate | 2017 |
| reponame_str | COLIBRI |
| repository.mail.fl_str_mv | mabel.seroubian@seciu.edu.uy |
| repository.name.fl_str_mv | COLIBRI - Universidad de la República |
| repository_id_str | 4771 |
| rights_invalid_str_mv | Licencia Creative Commons Atribución (CC - By 4.0) |
| spelling | Tomasco Introini Ivanna Haydée, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Biología.Boullosa Nicolás, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Biología.Hoffmann F.G.Lessa Gallinal Enrique Pablo, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Biología.2023-02-08T14:40:14Z2023-02-08T14:40:14Z2017Tomasco Introini, I, Boullosa, N, Hoffmann, F [y otros autores]. "Nucleotide sequence and results of test of adaptive evolution in the α-globin gene of octodontoid rodents". Data in Briel. [en línea] 2017, 15: 517-521. 7 h. DOI: 10.1016/j.dib.2017.09.017.2352-3409https://hdl.handle.net/20.500.12008/3575910.1016/j.dib.2017.09.017.The data presented in this article are related to the research article entitled “Molecular adaptive convergence in the α-globin gene in subterranean octodontid rodents” (Tomasco et al., 2017) [1]. This article shows the nucleotide sequences of α-globin subunit gene of hemoglobin of several South American caviomorph rodents, including subterranean and fossorial species. These sequences are deposited in Genbank, with accession numbers ranging from MF169881 to MF169898. Of a total of 429 nucleotides analyzed (143 codons), 100 variable sites and 43 amino acid replacements were reported. In this article we also show the results of TreeSaap (Woolley et al., 2003) [2] and MEME (Murrell et al., 2012) [3], that identified some replacement changes as interesting for future studies of adaptive evolution in this large rodent radiation.Submitted by Farías Verónica (vfarias@fcien.edu.uy) on 2023-02-06T14:15:56Z No. of bitstreams: 2 license_rdf: 19875 bytes, checksum: 9fdbed07f52437945402c4e70fa4773e (MD5) 10.1016j.dib.2017.09.017.pdf: 1117842 bytes, checksum: 3acc987a8a15e7e393b088588e3440c9 (MD5)Approved for entry into archive by Faget Cecilia (lfaget@fcien.edu.uy) on 2023-02-08T12:50:27Z (GMT) No. of bitstreams: 2 license_rdf: 19875 bytes, checksum: 9fdbed07f52437945402c4e70fa4773e (MD5) 10.1016j.dib.2017.09.017.pdf: 1117842 bytes, checksum: 3acc987a8a15e7e393b088588e3440c9 (MD5)Made available in DSpace by Luna Fabiana (fabiana.luna@seciu.edu.uy) on 2023-02-08T14:40:14Z (GMT). No. of bitstreams: 2 license_rdf: 19875 bytes, checksum: 9fdbed07f52437945402c4e70fa4773e (MD5) 10.1016j.dib.2017.09.017.pdf: 1117842 bytes, checksum: 3acc987a8a15e7e393b088588e3440c9 (MD5) Previous issue date: 20177 h.application/pdfen_USengElsevierData in Briel, 2017, 15: 517-521.Las obras depositadas en el Repositorio se rigen por la Ordenanza de los Derechos de la Propiedad Intelectual de la Universidad de la República.(Res. Nº 91 de C.D.C. de 8/III/1994 – D.O. 7/IV/1994) y por la Ordenanza del Repositorio Abierto de la Universidad de la República (Res. 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- Universidad de la Repúblicafalse |
| spellingShingle | Nucleotide sequence and results of test of adaptive evolution in the α-globin gene of octodontoid rodents Tomasco Introini, Ivanna Haydée Biology Molecular evolution |
| status_str | publishedVersion |
| title | Nucleotide sequence and results of test of adaptive evolution in the α-globin gene of octodontoid rodents |
| title_full | Nucleotide sequence and results of test of adaptive evolution in the α-globin gene of octodontoid rodents |
| title_fullStr | Nucleotide sequence and results of test of adaptive evolution in the α-globin gene of octodontoid rodents |
| title_full_unstemmed | Nucleotide sequence and results of test of adaptive evolution in the α-globin gene of octodontoid rodents |
| title_short | Nucleotide sequence and results of test of adaptive evolution in the α-globin gene of octodontoid rodents |
| title_sort | Nucleotide sequence and results of test of adaptive evolution in the α-globin gene of octodontoid rodents |
| topic | Biology Molecular evolution |
| url | https://hdl.handle.net/20.500.12008/35759 |
