Codon adaptation by synonymous mutations impacts the functional properties of the estrogen receptor-alpha protein in breast cancer cells
Resumen:
Oestrogen receptor-alpha (ERa) positivity is intimately associated with the development of hormone-dependent breast cancers. A major challenge in the treatment of these cancers is to understand and overcome the mechanisms of endocrine resistance. Recently, two distinct translation programmes using specific transfer RNA (tRNA) repertoires and codon usage frequencies were evidenced during cell proliferation and differentiation. Considering the phenotype switch of cancer cells to more proliferating and less-differentiated states, we can speculate that the changes in the tRNA pool and codon usage that likely occur make the ERa coding sequence no longer adapted, impacting translational rate, co-translational folding and the resulting functional properties of the protein. To verify this hypothesis, we generated an ERa synonymous coding sequence whose codon usage was optimized to the frequencies observed in genes expressed specifically in proliferating cells and then investigated the functional properties of the encoded receptor. We demonstrate that such a codon adaptation restores ERa activities to levels observed in differentiated cells, including: (a) an enhanced contribution exerted by transactivation function 1 (AF1) in ERa transcriptional activity; (b) enhanced interactions with nuclear receptor corepressor 1 and 2 [NCoR1 and NCoR2 (also known as SMRT) respectively], promoting repressive capability; and (c) reduced interactions with SRC proto-oncogene, nonreceptor tyrosine kinase (Src) and phosphoinositide 3-kinase (PI3K) p85 kinases, inhibiting MAPK and AKT signalling pathway.
2023 | |
Breast cancer Codon usage Co-translational folding Endocrine resistance Oestrogen receptor alpha |
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Inglés | |
Universidad de la República | |
COLIBRI | |
https://hdl.handle.net/20.500.12008/43174 | |
Acceso abierto | |
Licencia Creative Commons Atribución (CC - By 4.0) |
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---|---|
author | Clusan, Léa |
author2 | Percevault, Frederic Jullion, Emmanuelle Le Goff, Pascale Tiffoche, Christophe Fernández Calero, Tamara Métivier, Raphaël Marín Gutiérrez, Mónica Pakdel, Farzad Michel, Denis Flouriot, Gilles |
author2_role | author author author author author author author author author author |
author_facet | Clusan, Léa Percevault, Frederic Jullion, Emmanuelle Le Goff, Pascale Tiffoche, Christophe Fernández Calero, Tamara Métivier, Raphaël Marín Gutiérrez, Mónica Pakdel, Farzad Michel, Denis Flouriot, Gilles |
author_role | author |
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collection | COLIBRI |
dc.contributor.filiacion.none.fl_str_mv | Clusan Léa Percevault Frederic Jullion Emmanuelle Le Goff Pascale Tiffoche Christophe Fernández Calero Tamara, Instituto Pasteur (Montevideo). Métivier Raphaël Marín Gutiérrez Mónica, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Biología. Pakdel Farzad Michel Denis Flouriot Gilles |
dc.creator.none.fl_str_mv | Clusan, Léa Percevault, Frederic Jullion, Emmanuelle Le Goff, Pascale Tiffoche, Christophe Fernández Calero, Tamara Métivier, Raphaël Marín Gutiérrez, Mónica Pakdel, Farzad Michel, Denis Flouriot, Gilles |
dc.date.accessioned.none.fl_str_mv | 2024-03-19T12:15:59Z |
dc.date.available.none.fl_str_mv | 2024-03-19T12:15:59Z |
dc.date.issued.none.fl_str_mv | 2023 |
dc.description.abstract.none.fl_txt_mv | Oestrogen receptor-alpha (ERa) positivity is intimately associated with the development of hormone-dependent breast cancers. A major challenge in the treatment of these cancers is to understand and overcome the mechanisms of endocrine resistance. Recently, two distinct translation programmes using specific transfer RNA (tRNA) repertoires and codon usage frequencies were evidenced during cell proliferation and differentiation. Considering the phenotype switch of cancer cells to more proliferating and less-differentiated states, we can speculate that the changes in the tRNA pool and codon usage that likely occur make the ERa coding sequence no longer adapted, impacting translational rate, co-translational folding and the resulting functional properties of the protein. To verify this hypothesis, we generated an ERa synonymous coding sequence whose codon usage was optimized to the frequencies observed in genes expressed specifically in proliferating cells and then investigated the functional properties of the encoded receptor. We demonstrate that such a codon adaptation restores ERa activities to levels observed in differentiated cells, including: (a) an enhanced contribution exerted by transactivation function 1 (AF1) in ERa transcriptional activity; (b) enhanced interactions with nuclear receptor corepressor 1 and 2 [NCoR1 and NCoR2 (also known as SMRT) respectively], promoting repressive capability; and (c) reduced interactions with SRC proto-oncogene, nonreceptor tyrosine kinase (Src) and phosphoinositide 3-kinase (PI3K) p85 kinases, inhibiting MAPK and AKT signalling pathway. |
dc.format.extent.es.fl_str_mv | 22 h. |
dc.format.mimetype.es.fl_str_mv | application/pdf |
dc.identifier.citation.es.fl_str_mv | Clusan, L, Percevault, F, Jullion, E [y otros autores]. "Codon adaptation by synonymous mutations impacts the functional properties of the estrogen receptor-alpha protein in breast cancer cells". Molecular Oncology. [en línea] 2023, 17(7): 1302–1323. 22 h. DOI: 10.1002/1878-0261.13399. |
dc.identifier.doi.none.fl_str_mv | 10.1002/1878-0261.13399 |
dc.identifier.issn.none.fl_str_mv | 1878-0261 |
dc.identifier.uri.none.fl_str_mv | https://hdl.handle.net/20.500.12008/43174 |
dc.language.iso.none.fl_str_mv | en eng |
dc.publisher.es.fl_str_mv | FEBS |
dc.relation.ispartof.es.fl_str_mv | Molecular Oncology, 2023, 17(7): 1302–1323. |
dc.rights.license.none.fl_str_mv | Licencia Creative Commons Atribución (CC - By 4.0) |
dc.rights.none.fl_str_mv | info:eu-repo/semantics/openAccess |
dc.source.none.fl_str_mv | reponame:COLIBRI instname:Universidad de la República instacron:Universidad de la República |
dc.subject.es.fl_str_mv | Breast cancer Codon usage Co-translational folding Endocrine resistance Oestrogen receptor alpha |
dc.title.none.fl_str_mv | Codon adaptation by synonymous mutations impacts the functional properties of the estrogen receptor-alpha protein in breast cancer cells |
dc.type.es.fl_str_mv | Artículo |
dc.type.none.fl_str_mv | info:eu-repo/semantics/article |
dc.type.version.none.fl_str_mv | info:eu-repo/semantics/publishedVersion |
description | Oestrogen receptor-alpha (ERa) positivity is intimately associated with the development of hormone-dependent breast cancers. A major challenge in the treatment of these cancers is to understand and overcome the mechanisms of endocrine resistance. Recently, two distinct translation programmes using specific transfer RNA (tRNA) repertoires and codon usage frequencies were evidenced during cell proliferation and differentiation. Considering the phenotype switch of cancer cells to more proliferating and less-differentiated states, we can speculate that the changes in the tRNA pool and codon usage that likely occur make the ERa coding sequence no longer adapted, impacting translational rate, co-translational folding and the resulting functional properties of the protein. To verify this hypothesis, we generated an ERa synonymous coding sequence whose codon usage was optimized to the frequencies observed in genes expressed specifically in proliferating cells and then investigated the functional properties of the encoded receptor. We demonstrate that such a codon adaptation restores ERa activities to levels observed in differentiated cells, including: (a) an enhanced contribution exerted by transactivation function 1 (AF1) in ERa transcriptional activity; (b) enhanced interactions with nuclear receptor corepressor 1 and 2 [NCoR1 and NCoR2 (also known as SMRT) respectively], promoting repressive capability; and (c) reduced interactions with SRC proto-oncogene, nonreceptor tyrosine kinase (Src) and phosphoinositide 3-kinase (PI3K) p85 kinases, inhibiting MAPK and AKT signalling pathway. |
eu_rights_str_mv | openAccess |
format | article |
id | COLIBRI_0bdc35fda82f1e36592e6e16a80ded37 |
identifier_str_mv | Clusan, L, Percevault, F, Jullion, E [y otros autores]. "Codon adaptation by synonymous mutations impacts the functional properties of the estrogen receptor-alpha protein in breast cancer cells". Molecular Oncology. [en línea] 2023, 17(7): 1302–1323. 22 h. DOI: 10.1002/1878-0261.13399. 1878-0261 10.1002/1878-0261.13399 |
instacron_str | Universidad de la República |
institution | Universidad de la República |
instname_str | Universidad de la República |
language | eng |
language_invalid_str_mv | en |
network_acronym_str | COLIBRI |
network_name_str | COLIBRI |
oai_identifier_str | oai:colibri.udelar.edu.uy:20.500.12008/43174 |
publishDate | 2023 |
reponame_str | COLIBRI |
repository.mail.fl_str_mv | mabel.seroubian@seciu.edu.uy |
repository.name.fl_str_mv | COLIBRI - Universidad de la República |
repository_id_str | 4771 |
rights_invalid_str_mv | Licencia Creative Commons Atribución (CC - By 4.0) |
spelling | Clusan LéaPercevault FredericJullion EmmanuelleLe Goff PascaleTiffoche ChristopheFernández Calero Tamara, Instituto Pasteur (Montevideo).Métivier RaphaëlMarín Gutiérrez Mónica, Universidad de la República (Uruguay). Facultad de Ciencias. Instituto de Biología.Pakdel FarzadMichel DenisFlouriot Gilles2024-03-19T12:15:59Z2024-03-19T12:15:59Z2023Clusan, L, Percevault, F, Jullion, E [y otros autores]. "Codon adaptation by synonymous mutations impacts the functional properties of the estrogen receptor-alpha protein in breast cancer cells". Molecular Oncology. [en línea] 2023, 17(7): 1302–1323. 22 h. DOI: 10.1002/1878-0261.13399.1878-0261https://hdl.handle.net/20.500.12008/4317410.1002/1878-0261.13399Oestrogen receptor-alpha (ERa) positivity is intimately associated with the development of hormone-dependent breast cancers. A major challenge in the treatment of these cancers is to understand and overcome the mechanisms of endocrine resistance. Recently, two distinct translation programmes using specific transfer RNA (tRNA) repertoires and codon usage frequencies were evidenced during cell proliferation and differentiation. Considering the phenotype switch of cancer cells to more proliferating and less-differentiated states, we can speculate that the changes in the tRNA pool and codon usage that likely occur make the ERa coding sequence no longer adapted, impacting translational rate, co-translational folding and the resulting functional properties of the protein. To verify this hypothesis, we generated an ERa synonymous coding sequence whose codon usage was optimized to the frequencies observed in genes expressed specifically in proliferating cells and then investigated the functional properties of the encoded receptor. We demonstrate that such a codon adaptation restores ERa activities to levels observed in differentiated cells, including: (a) an enhanced contribution exerted by transactivation function 1 (AF1) in ERa transcriptional activity; (b) enhanced interactions with nuclear receptor corepressor 1 and 2 [NCoR1 and NCoR2 (also known as SMRT) respectively], promoting repressive capability; and (c) reduced interactions with SRC proto-oncogene, nonreceptor tyrosine kinase (Src) and phosphoinositide 3-kinase (PI3K) p85 kinases, inhibiting MAPK and AKT signalling pathway.Submitted by Pintos Natalia (nataliapintosmvd@gmail.com) on 2024-03-15T15:59:15Z No. of bitstreams: 2 license_rdf: 24251 bytes, checksum: 71ed42ef0a0b648670f707320be37b90 (MD5) 10.1002.1878-0261.13399.pdf: 1998299 bytes, checksum: 37d4ae2461b7d06ee387a8f8aecfe6a2 (MD5)Approved for entry into archive by Faget Cecilia (lfaget@fcien.edu.uy) on 2024-03-19T11:52:09Z (GMT) No. of bitstreams: 2 license_rdf: 24251 bytes, checksum: 71ed42ef0a0b648670f707320be37b90 (MD5) 10.1002.1878-0261.13399.pdf: 1998299 bytes, checksum: 37d4ae2461b7d06ee387a8f8aecfe6a2 (MD5)Made available in DSpace by Luna Fabiana (fabiana.luna@seciu.edu.uy) on 2024-03-19T12:15:59Z (GMT). No. of bitstreams: 2 license_rdf: 24251 bytes, checksum: 71ed42ef0a0b648670f707320be37b90 (MD5) 10.1002.1878-0261.13399.pdf: 1998299 bytes, checksum: 37d4ae2461b7d06ee387a8f8aecfe6a2 (MD5) Previous issue date: 202322 h.application/pdfenengFEBSMolecular Oncology, 2023, 17(7): 1302–1323.Las obras depositadas en el Repositorio se rigen por la Ordenanza de los Derechos de la Propiedad Intelectual de la Universidad de la República.(Res. Nº 91 de C.D.C. de 8/III/1994 – D.O. 7/IV/1994) y por la Ordenanza del Repositorio Abierto de la Universidad de la República (Res. Nº 16 de C.D.C. de 07/10/2014)info:eu-repo/semantics/openAccessLicencia Creative Commons Atribución (CC - By 4.0)Breast cancerCodon usageCo-translational foldingEndocrine resistanceOestrogen receptor alphaCodon adaptation by synonymous mutations impacts the functional properties of the estrogen receptor-alpha protein in breast cancer cellsArtículoinfo:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionreponame:COLIBRIinstname:Universidad de la Repúblicainstacron:Universidad de la RepúblicaClusan, LéaPercevault, FredericJullion, EmmanuelleLe Goff, PascaleTiffoche, ChristopheFernández Calero, TamaraMétivier, RaphaëlMarín Gutiérrez, MónicaPakdel, FarzadMichel, DenisFlouriot, GillesLICENSElicense.txtlicense.txttext/plain; charset=utf-84267http://localhost:8080/xmlui/bitstream/20.500.12008/43174/5/license.txt6429389a7df7277b72b7924fdc7d47a9MD55CC-LICENSElicense_urllicense_urltext/plain; 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- Universidad de la Repúblicafalse |
spellingShingle | Codon adaptation by synonymous mutations impacts the functional properties of the estrogen receptor-alpha protein in breast cancer cells Clusan, Léa Breast cancer Codon usage Co-translational folding Endocrine resistance Oestrogen receptor alpha |
status_str | publishedVersion |
title | Codon adaptation by synonymous mutations impacts the functional properties of the estrogen receptor-alpha protein in breast cancer cells |
title_full | Codon adaptation by synonymous mutations impacts the functional properties of the estrogen receptor-alpha protein in breast cancer cells |
title_fullStr | Codon adaptation by synonymous mutations impacts the functional properties of the estrogen receptor-alpha protein in breast cancer cells |
title_full_unstemmed | Codon adaptation by synonymous mutations impacts the functional properties of the estrogen receptor-alpha protein in breast cancer cells |
title_short | Codon adaptation by synonymous mutations impacts the functional properties of the estrogen receptor-alpha protein in breast cancer cells |
title_sort | Codon adaptation by synonymous mutations impacts the functional properties of the estrogen receptor-alpha protein in breast cancer cells |
topic | Breast cancer Codon usage Co-translational folding Endocrine resistance Oestrogen receptor alpha |
url | https://hdl.handle.net/20.500.12008/43174 |